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This paper considers the problem of matching fragment to organism using its complete genome. Our method is based on the probability measure representation of a genome. We first demonstrate that these probability measures can be modelled as…

Biological Physics · Physics 2009-11-07 V. V. Anh , K. S. Lau , Z. G. Yu

In this projecting work we propose a mass spectrometric patch-clamp equipment with the capillary performing both a local potential registration at the cell membrane and the analyte suction simultaneously. This paper provides a current…

Subcellular Processes · Quantitative Biology 2015-11-24 O. V. Gradov , M. A. Gradova

Fractals are self-repeating patterns which have dimensions given by fractions rather than integers. While the dimension of a system unambiguously defines its properties, a fractional dimensional system can exhibit interesting properties.…

Materials Science · Physics 2019-11-20 Mohammed Ghadiyali , Sajeev Chacko

Cooperative spectrum sensing is a robust strategy that enhances the detection probability of primary licensed users. However, a large number of detectors reporting to a fusion center for a final decision causes significant delay and also…

Information Theory · Computer Science 2015-05-28 Laila Hesham , Ahmed Sultan , Mohammed Nafie

A deep understanding of the intricate interactions between particles within a system is a key approach to revealing the essential characteristics of the system, whether it is an in-depth analysis of molecular properties in the field of…

High Energy Physics - Lattice · Physics 2024-12-17 Ru Geng , Yixian Gao , Jian Zu , Hong-Kun Zhang

We introduce and validate a theoretical framework for coherent control of multichannel scattering of linear waves to route waves through complex geometries with multiple scattering. We show that steady-state perfect routing solutions are…

Multi-spectral computed tomography is an emerging technology for the non-destructive identification of object materials and the study of their physical properties. Applications of this technology can be found in various scientific and…

Computer Vision and Pattern Recognition · Computer Science 2018-10-30 Christian Kehl , Wail Mustafa , Jan Kehres , Anders Bjorholm Dahl , Ulrik Lund Olsen

Chromatin fibers composed of DNA and proteins fold into consecutive loops to form rod-shaped chromosome in mitosis. Although the loop growth dynamics is investigated in several studies, its detailed processes are unclear. Here, we describe…

Soft Condensed Matter · Physics 2022-05-11 Hiroshi Yokota , Masashi Tachikawa

Abundant in coastal areas, sea turtles are affected by high-intensity acoustic anthropogenic sounds. In this paper, we offer a pattern analysis-based detection approach to serve as a warning system for the existence of nearby sea turtles.…

Signal Processing · Electrical Eng. & Systems 2022-05-20 Dror Kipnis , Yaniv Levy , Roee Diamant

Peaks in the probabilities of loops or bubbles, helical segments, and unzipping ends in melting DNA are found in this article using a peak finding method that maps the hierarchical structure of certain energy landscapes. The peaks indicate…

Biomolecules · Quantitative Biology 2007-05-23 E. Tostesen

Despite being one of the most basic tasks in software development, debugging is still performed in a mostly manual way, leading to high cost and low performance. To address this problem, researchers have studied promising approaches, such…

Software Engineering · Computer Science 2017-11-28 Higor A. de Souza , Marcos L. Chaim , Fabio Kon

We develop an algorithm to detect community structure in complex networks. The algorithm is based on spectral methods and takes into account weights and links orientations. Since the method detects efficiently clustered nodes in large…

Disordered Systems and Neural Networks · Physics 2009-11-10 Andrea Capocci , Vito D. P. Servedio , Guido Caldarelli , Francesca Colaiori

Structured illumination enables the tailoring of an imaging device's optical transfer function to enhance resolution. We propose the incorporation of a temporal periodic modulation, specifically a rotating mask, to encode multiple transfer…

Optics · Physics 2023-06-27 Guillaume Noetinger , Fabrice Lemoult , Sébastien M. Popoff

We introduce and demonstrate a new approach to measuring coherent electron wave packets using high-harmonic spectroscopy. By preparing a molecule in a coherent superposition of electronic states, we show that electronic coherence opens…

Chemical Physics · Physics 2014-07-09 P. M. Kraus , S. B. Zhang , A. Gijsbertsen , R. R. Lucchese , N. Rohringer , H. J. Wörner

For many complex materials systems, low-energy electron microscopy (LEEM) offers detailed insights into morphology and crystallography by naturally combining real-space and reciprocal-space information. Its unique strength, however, is that…

Conventional cell tracking methods detect multiple cells in each frame (detection) and then associate the detection results in successive time-frames (association). Most cell tracking methods perform the association task independently from…

Computer Vision and Pattern Recognition · Computer Science 2020-02-27 Junya Hayashida , Kazuya Nishimura , Ryoma Bise

Fluorescence spectroscopy is an image correlation technique to analyze and characterize the molecular dynamics from a sequence of fluorescence images. Many image correlation techniques have been developed for different applications [1]. But…

Quantitative Methods · Quantitative Biology 2017-10-24 C. Chen , P. Paul-Gilloteaux , T. Vignaud , J. Salamero , F. Waharte

Biological and social systems consist of myriad interacting units. The interactions can be represented in the form of a graph or network. Measurements of these graphs can reveal the underlying structure of these interactions, which provides…

Machine Learning · Statistics 2017-10-25 Norbert Binkiewicz , Joshua T. Vogelstein , Karl Rohe

We survey the application of a relatively new branch of statistical physics--"community detection"-- to data mining. In particular, we focus on the diagnosis of materials and automated image segmentation. Community detection describes the…

Materials Science · Physics 2017-11-22 Z. Nussinov , P. Ronhovde , Dandan Hu , S. Chakrabarty , M. Sahu , Bo Sun , N. A. Mauro , K. K. Sahu

Community detection algorithms have been widely used to study the organization of complex systems like the brain. A principal appeal of these techniques is their ability to identify a partition of brain regions (or nodes) into communities,…

Neurons and Cognition · Quantitative Biology 2017-04-20 Arian Ashourvan , Qawi K. Telesford , Timothy Verstynen , Jean M. Vettel , Danielle S. Bassett
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