Related papers: Faster Algorithms for Text-to-Pattern Hamming Dist…
One of the landmarks in approximation algorithms is the $O(\sqrt{\log n})$-approximation algorithm for the Uniform Sparsest Cut problem by Arora, Rao and Vazirani from 2004. The algorithm is based on a semidefinite program that finds an…
The distance of a stabilizer quantum code is a very important feature since it determines the number of errors that can be detected and corrected. We present three new fast algorithms and implementations for computing the symplectic…
We develop catalytic algorithms for fundamental problems in algorithm design that run in polynomial time, use only $\mathcal{O}(\log(n))$ workspace, and use sublinear catalytic space matching the best-known space bounds of non-catalytic…
The currently fastest algorithm for regular expression pattern matching and membership improves the classical O(nm) time algorithm by a factor of about log^{3/2}n. Instead of focussing on general patterns we analyse homogeneous patterns of…
The problem of parsing has been studied extensively for various formal grammars. Given an input string and a grammar, the parsing problem is to check if the input string belongs to the language generated by the grammar. A closely related…
Searching for all occurrences of a pattern in a text is a fundamental problem in computer science with applications in many other fields, like natural language processing, information retrieval and computational biology. In the last two…
The equidistant subsequence pattern matching problem is considered. Given a pattern string $P$ and a text string $T$, we say that $P$ is an \emph{equidistant subsequence} of $T$ if $P$ is a subsequence of the text such that consecutive…
Real-world data often comes in compressed form. Analyzing compressed data directly (without decompressing it) can save space and time by orders of magnitude. In this work, we focus on fundamental sequence comparison problems and try to…
In the pairwise weighted spanner problem, the input consists of an $n$-vertex-directed graph, where each edge is assigned a cost and a length. Given $k$ vertex pairs and a distance constraint for each pair, the goal is to find a…
The (Non-Preemptive) Throughput Maximization problem is a natural and fundamental scheduling problem. We are given $n$ jobs, where each job $j$ is characterized by a processing time and a time window, contained in a global interval $[0,T)$,…
In this paper we present an $\tilde{O}(m\sqrt{n}\log^{O(1)}U)$ time algorithm for solving the maximum flow problem on directed graphs with $m$ edges, $n$ vertices, and capacity ratio $U$. This improves upon the previous fastest running time…
We consider the classical makespan minimization scheduling problem where $n$ jobs must be scheduled on $m$ identical machines. Using weighted random sampling, we developed two sublinear time approximation schemes: one for the case where $n$…
We study the problem of solving semidefinite programs (SDP) in the streaming model. Specifically, $m$ constraint matrices and a target matrix $C$, all of size $n\times n$ together with a vector $b\in \mathbb{R}^m$ are streamed to us…
In a classical problem in scheduling, one has $n$ unit size jobs with a precedence order and the goal is to find a schedule of those jobs on $m$ identical machines as to minimize the makespan. It is one of the remaining four open problems…
In this paper we consider the $p$-Norm Hamming Centroid problem which asks to determine whether some given binary strings have a centroid with a bound on the $p$-norm of its Hamming distances to the strings. Specifically, given a set of…
Finding the length of the longest increasing subsequence (LIS) is a classic algorithmic problem. Let $n$ denote the size of the array. Simple $O(n\log n)$ algorithms are known for this problem. We develop a polylogarithmic time randomized…
We consider the problem of designing sublinear time algorithms for estimating the cost of a minimum metric traveling salesman (TSP) tour. Specifically, given access to a $n \times n$ distance matrix $D$ that specifies pairwise distances…
Suppose a language $L$ can be decided by a bounded-error randomized algorithm that runs in space $S$ and time $n \cdot \text{poly}(S)$. We give a randomized algorithm for $L$ that still runs in space $O(S)$ and time $n \cdot \text{poly}(S)$…
In this paper we consider several variants of the pattern matching problem. In particular, we investigate the following problems: 1) Pattern matching with k mismatches; 2) Approximate counting of mismatches; and 3) Pattern matching with…
In the field of topological data analysis, persistence modules are used to express geometrical features of data sets. The matching distance $d_\mathcal{M}$ measures the difference between $2$-parameter persistence modules by taking the…