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In software engineering, different approaches and machine learning models leverage different types of data: source code, textual information, historical data. An important part of any project is its dependencies. The list of dependencies is…

Software Engineering · Computer Science 2022-09-09 Yaroslav Golubev , Egor Bogomolov , Egor Bulychev , Timofey Bryksin

Language-based ecosystems (LBE), i.e., software ecosystems based on a single programming language, are very common. Examples include the npm ecosystem for JavaScript, and PyPI for Python. These environments encourage code reuse between…

Cryptography and Security · Computer Science 2021-12-01 Ruturaj K. Vaidya , Lorenzo De Carli , Drew Davidson , Vaibhav Rastogi

Python has become one of the most popular programming languages for software development due to its simplicity, readability, and versatility. As the Python ecosystem grows, developers face increasing challenges in avoiding module conflicts,…

Software Engineering · Computer Science 2024-01-05 Ruofan Zhu , Xingyu Wang , Chengwei Liu , Zhengzi Xu , Wenbo Shen , Rui Chang , Yang Liu

Modern software systems rely on dependency networks of reusable libraries, where breaking changes propagate and cause downstream consumers to fail. Despite growing research across ecosystems, no comprehensive synthesis exists. We conduct a…

Software Engineering · Computer Science 2026-05-26 Juntao Chen , Tingting Bi , Yanlin Wang , Patanamon Thongtanunam

Contemporary software is characterized by reuse of components that are declared as dependencies and that are received from package managers/registries, such as, NPM, PyPI, RubyGems, Maven Central, etc. Direct and indirect dependency…

Software Engineering · Computer Science 2022-03-04 Rolf-Helge Pfeiffer

Dependency resolution is the task of selecting package versions that can be installed together without conflicts. It accounts for a significant share of build failures in modern software projects. In the Python ecosystem, this task is…

Software Engineering · Computer Science 2026-05-13 Kowshik Chowdhury , Dipayan Banik , Shazibul Islam Shamim

Large Language Models have advanced automated software development, however, it remains a challenge to correctly infer dependencies, namely, identifying the internal components and external packages required for a repository to successfully…

Modern software systems are expected to be secure and contain all the latest features, even when new versions of software are released multiple times an hour. Each system may include many interacting packages. The problem of installing…

Software Engineering · Computer Science 2018-11-15 Ran Ben Basat , Maayan Goldstein , Itai Segall

Python has become a popular programming language because of its excellent programmability. Many modern software packages utilize Python for high-level algorithm design and depend on native libraries written in C/C++/Fortran for efficient…

Programming Languages · Computer Science 2021-07-02 Jialiang Tan , Yu Chen , Zhenming Liu , Bin Ren , Shuaiwen Leon Song , Xipeng Shen , Xu Liu

The Python Package Index (PyPI) has become a target for malicious actors, yet existing detection tools generate false positive rates of 15-30%, incorrectly flagging one-third of legitimate packages as malicious. This problem arises because…

Cryptography and Security · Computer Science 2026-01-28 Wenbo Guo , Chengwei Liu , Ming Kang , Yiran Zhang , Jiahui Wu , Zhengzi Xu , Vinay Sachidananda , Yang Liu

Python is very popular because it can be used for a wider audience of developers, data scientists, machine learning experts and so on. Like other programming languages, there are beginner to advanced levels of writing Python code. However,…

Software Engineering · Computer Science 2024-10-11 Indira Febriyanti , Youmei Fan , Kazumasa Shimari , Kenichi Matsumoto , Raula Gaikovina Kula

We consider the problem of identifying the provenance of free/open source software (FOSS) and specifically the need of identifying where reused source code has been copied from. We propose a lightweight approach to solve the problem based…

Software Engineering · Computer Science 2023-05-25 Yiming Sun , Daniel M. German , Stefano Zacchiroli

With the rise of the library ecosystem (such as NPM for JavaScript and PyPI for Python), a developer has access to a multitude of library packages that they can adopt as dependencies into their application.Prior work has found that these…

Software Engineering · Computer Science 2024-07-02 Supatsara Wattanakriengkrai , Christoph Treude , Raula Gaikovina Kula

SourceRank is a scoring system made of 18 metrics that assess the popularity and quality of open-source packages. Despite being used in several recent studies, none has thoroughly analyzed its reliability against evasion attacks aimed at…

Cryptography and Security · Computer Science 2026-01-01 Biagio Montaruli , Serena Elisa Ponta , Luca Compagna , Davide Balzarotti

As a mixed result of intensive dependency on third-party libraries, flexible mechanism to declare dependencies, and increased number of modules in a project, multiple versions of the same third-party library are directly depended in…

Software Engineering · Computer Science 2020-02-26 Kaifeng Huang , Bihuan Chen , Bowen Shi , Ying Wang , Congying Xu , Xin Peng

Selecting third-party software packages in open-source ecosystems like Python is challenging due to the large number of alternatives and limited transparent evidence for comparison. Generative AI tools are increasingly used in development…

Tests that cause spurious failures without any code changes, i.e., flaky tests, hamper regression testing, increase maintenance costs, may shadow real bugs, and decrease trust in tests. While the prevalence and importance of flakiness is…

Software Engineering · Computer Science 2022-02-15 Martin Gruber , Stephan Lukasczyk , Florian Kroiß , Gordon Fraser

The utilization of third-party open-source libraries is widespread in modern software development. Due to the dependency relationships, vulnerabilities within open-source libraries pose significant security threats to downstream software.…

Software Engineering · Computer Science 2026-05-07 Liyou Chen , Hailong Sun , Xiang Gao , Lin Shi , Yixin Yang , Yi Xu

Malicious code in open-source repositories such as PyPI poses a growing threat to software supply chains. Traditional rule-based tools often overlook the semantic patterns in source code that are crucial for identifying adversarial…

Software Engineering · Computer Science 2026-01-27 Muhammad Umar Zeshan , Motunrayo Ibiyo , Claudio Di Sipio , Phuong T. Nguyen , Davide Di Ruscio

A package's source code repository records the development history of the package, providing indispensable information for the use and risk monitoring of the package. However, a package release often misses its source code repository due to…

Software Engineering · Computer Science 2024-04-26 Kai Gao , Weiwei Xu , Wenhao Yang , Minghui Zhou