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Limited availability of labeled physiological data often prohibits the use of powerful supervised deep learning models in the biomedical machine intelligence domain. We approach this problem and propose a novel encoding framework that…

Machine Learning · Computer Science 2023-06-13 Philipp Hallgarten , David Bethge , Ozan Özdenizci , Tobias Grosse-Puppendahl , Enkelejda Kasneci

Medical time-series data captures the dynamic progression of patient conditions, playing a vital role in modern clinical decision support systems. However, real-world clinical data is highly heterogeneous and inconsistently formatted.…

Machine Learning · Computer Science 2026-04-01 Zhongheng Jiang , Yuechao Zhao , Donglin Xie , Chenxi Sun , Rongchen Lu , Silu Luo , Zisheng Liang , Shenda Hong

Multi-modal biomedical time series (MBTS) data offers a holistic view of the physiological state, holding significant importance in various bio-medical applications. Owing to inherent noise and distribution gaps across different modalities,…

Machine Learning · Computer Science 2023-12-08 Hongbo Guo , Xinzi Xu , Hao Wu , Guoxing Wang

Self-supervised learning (SSL) is a data-driven learning approach that utilizes the innate structure of the data to guide the learning process. In contrast to supervised learning, which depends on external labels, SSL utilizes the inherent…

Machine Learning · Computer Science 2025-04-09 Einari Vaaras , Manu Airaksinen , Okko Räsänen

Self-supervised learning (SSL) for clinical time series data has received significant attention in recent literature, since these data are highly rich and provide important information about a patient's physiological state. However, most…

Machine Learning · Computer Science 2023-07-21 Aniruddh Raghu , Payal Chandak , Ridwan Alam , John Guttag , Collin M. Stultz

Multi-mode tensor time series (TTS) can be found in many domains, such as search engines and environmental monitoring systems. Learning representations of a TTS benefits various applications, but it is also challenging since the…

Machine Learning · Computer Science 2026-03-02 Kohei Obata , Taichi Murayama , Zheng Chen , Yasuko Matsubara , Yasushi Sakurai

Self-Supervised Learning (SSL) has emerged as a powerful paradigm to mitigate the reliance on large, annotated datasets, a common bottleneck in medical image analysis. However, standard SSL methods, which rely on simple geometric and color…

Computer Vision and Pattern Recognition · Computer Science 2026-05-27 Joao Batista Florindo

Learning meaningful representations from medical time series (MedTS) such as ECG or EEG signals is a critical challenge. These signals are often high-dimensional, variable-length and rife with noise. Existing self-supervised approaches,…

Machine Learning · Computer Science 2026-05-04 Huayu Li , ZhengXiao He , Xiwen Chen , Jingjing Wang , Siyuan Tian , Jinghao Wen , Ao Li

Multivariate time series (MTS) are ubiquitous in domains such as healthcare, climate science, and industrial monitoring, but their high dimensionality, limited labeled data, and non-stationary nature pose significant challenges for…

Machine Learning · Computer Science 2025-09-09 Jia Wang , Xiao Wang , Chi Zhang

Limited availability of labeled data for machine learning on multimodal time-series extensively hampers progress in the field. Self-supervised learning (SSL) is a promising approach to learning data representations without relying on…

Machine Learning · Computer Science 2024-02-20 Shohreh Deldari , Dimitris Spathis , Mohammad Malekzadeh , Fahim Kawsar , Flora Salim , Akhil Mathur

The lack of labeled data is a key challenge for learning useful representation from time series data. However, an unsupervised representation framework that is capable of producing high quality representations could be of great value. It is…

Machine Learning · Statistics 2022-03-18 Kristoffer Wickstrøm , Michael Kampffmeyer , Karl Øyvind Mikalsen , Robert Jenssen

Analyzing temporal developments is crucial for the accurate prognosis of many medical conditions. Temporal changes that occur over short time scales are key to assessing the health of physiological functions, such as the cardiac cycle.…

Computer Vision and Pattern Recognition · Computer Science 2024-10-29 Chengzhi Shen , Martin J. Menten , Hrvoje Bogunović , Ursula Schmidt-Erfurth , Hendrik Scholl , Sobha Sivaprasad , Andrew Lotery , Daniel Rueckert , Paul Hager , Robbie Holland

Effectively representing medical concepts and patients is important for healthcare analytical applications. Representing medical concepts for healthcare analytical tasks requires incorporating medical domain knowledge and prior information…

Machine Learning · Computer Science 2023-05-02 Shaodong Wang , Qing Li , Wenli Zhang

Large-scale volumetric medical images with annotation are rare, costly, and time prohibitive to acquire. Self-supervised learning (SSL) offers a promising pre-training and feature extraction solution for many downstream tasks, as it only…

Computer Vision and Pattern Recognition · Computer Science 2023-03-16 Ke Yu , Li Sun , Junxiang Chen , Max Reynolds , Tigmanshu Chaudhary , Kayhan Batmanghelich

Self-supervised representation learning of Multivariate Time Series (MTS) is a challenging task and attracts increasing research interests in recent years. Many previous works focus on the pretext task of self-supervised learning and…

Machine Learning · Computer Science 2022-03-10 Yijiang Chen , Xiangdong Zhou , Zhen Xing , Zhidan Liu , Minyang Xu

Learning from Multivariate Time Series (MTS) has attracted widespread attention in recent years. In particular, label shortage is a real challenge for the classification task on MTS, considering its complex dimensional and sequential data…

Machine Learning · Computer Science 2021-10-12 Jingwei Zuo , Karine Zeitouni , Yehia Taher

In visual Reinforcement Learning (RL), learning from pixel-based observations poses significant challenges on sample efficiency, primarily due to the complexity of extracting informative state representations from high-dimensional data.…

Computer Vision and Pattern Recognition · Computer Science 2024-09-05 Jiarui Sun , M. Ugur Akcal , Wei Zhang , Girish Chowdhary

Self-supervised learning (SSL) methods have shown promise for medical imaging applications by learning meaningful visual representations, even when the amount of labeled data is limited. Here, we extend state-of-the-art contrastive learning…

Unsupervised representation learning approaches aim to learn discriminative feature representations from unlabeled data, without the requirement of annotating every sample. Enabling unsupervised representation learning is extremely crucial…

Machine Learning · Computer Science 2023-08-04 Qianwen Meng , Hangwei Qian , Yong Liu , Yonghui Xu , Zhiqi Shen , Lizhen Cui

The complexity and heterogeneity of data in many real-world applications pose significant challenges for traditional machine learning and signal processing techniques. For instance, in medicine, effective analysis of diverse physiological…

Machine Learning · Computer Science 2024-08-16 Nimeesha Chan , Felix Parker , William Bennett , Tianyi Wu , Mung Yao Jia , James Fackler , Kimia Ghobadi
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