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The rapid evolution of Large Language Models (LLMs) highlights the necessity for ethical considerations and data integrity in AI development, particularly emphasizing the role of FAIR (Findable, Accessible, Interoperable, Reusable) data…

Computation and Language · Computer Science 2024-04-04 Shaina Raza , Shardul Ghuge , Chen Ding , Elham Dolatabadi , Deval Pandya

The FAIR (Findable, Accessible, Interoperable, and Reusable) data principles [1] promote the interoperability of scientific data by encouraging the use of persistent identifiers, standardized vocabularies, and formal metadata structures.…

Understanding the decision process of neural networks is hard. One vital method for explanation is to attribute its decision to pivotal features. Although many algorithms are proposed, most of them solely improve the faithfulness to the…

Artificial Intelligence · Computer Science 2022-09-07 Yuyou Gan , Yuhao Mao , Xuhong Zhang , Shouling Ji , Yuwen Pu , Meng Han , Jianwei Yin , Ting Wang

Background: Many published machine learning studies are irreproducible. Issues with methodology and not properly accounting for variation introduced by the algorithm themselves or their implementations are attributed as the main…

Machine Learning · Computer Science 2023-04-17 Odd Erik Gundersen , Kevin Coakley , Christine Kirkpatrick , Yolanda Gil

We report a workflow and the output of a natural language processing (NLP)-based procedure to mine the extant metal-organic framework (MOF) literature describing structurally characterized MOFs and their solvent removal and thermal…

Materials Science · Physics 2021-09-17 A. Nandy , G. Terrones , N. Arunachalam , C. Duan , D. W. Kastner , H. J. Kulik

With the current trend in Model-Based Systems Engineering towards Digital Engineering and early Validation & Verification, experiments are increasingly used to estimate system parameters and explore design decisions. Managing such…

Software Engineering · Computer Science 2025-09-16 Johan Cederbladh , Loek Cleophas , Eduard Kamburjan , Lucas Lima , Rakshit Mittal , Hans Vangheluwe

Metal-organic framework (MOF) databases have grown rapidly through experimental deposition and large-scale literature extraction, but recent analyses show that nearly half of their entries contain substantial structural errors. These…

Databases · Computer Science 2026-04-06 Honghui Kim , Dohoon Kim , Jihan Kim

Reproducibility and replicability of research findings are central to the scientific integrity of epidemiology. In addition, many research questions require combiningdata from multiple sources to achieve adequate statistical power. However,…

Metal-organic frameworks (MOFs) are a class of crystalline materials with promising applications in many areas such as carbon capture and drug delivery. In this work, we introduce MOFFlow, the first deep generative model tailored for MOF…

Biomolecules · Quantitative Biology 2025-03-20 Nayoung Kim , Seongsu Kim , Minsu Kim , Jinkyoo Park , Sungsoo Ahn

Growth in computational materials science and initiatives such as the Materials Genome Initiative (MGI) and the European Materials Modelling Council (EMMC) has motivated the development and application of ontologies. A key factor has been…

Digital Libraries · Computer Science 2024-03-05 Scott McClellan , Yuan An , Xintong Zhao , Xia Lin , Jane Greenberg

Metal organic framework (MOF) materials have attracted a lot of attention due to their numerous applications in fields such as hydrogen storage, carbon capture, and gas sequestration. In all these applications, van der Waals forces dominate…

Materials Science · Physics 2014-03-13 Sebastian Zuluaga , Pieremanuele Canepa , Kui Tan , Yves J. Chabal , Timo Thonhauser

Metal-organic frameworks (MOFs) are an incredibly diverse group of highly porous hybrid materials, which are interesting for a wide range of possible applications. For a reliable description of many of their properties accurate…

Materials Science · Physics 2024-11-26 Sandro Wieser , Egbert Zojer

Metal Organic Frameworks (MOFs) are promising materials to help mitigate the effects of global warming by selectively absorbing $\text{CO}_{2}$ for direct capture. Accurate quantum chemistry simulations are a useful tool to help select and…

By combining metal nodes with organic linkers we can potentially synthesize millions of possible metal organic frameworks (MOFs). At present, we have libraries of over ten thousand synthesized materials and millions of in-silico predicted…

Materials Science · Physics 2020-06-12 Kevin Maik Jablonka , Daniele Ongari , Seyed Mohamad Moosavi , Berend Smit

Electrospinning is a versatile nanofabrication technique whose outcomes emerge from a complex, high-dimensional interplay between solution properties, processing parameters, and environmental conditions. Optimizing this parameter space for…

Databases · Computer Science 2026-05-13 Mehrab Mahdian , Ferenc Ender , Tamas Pardy

Entity matching (EM) is a fundamental task in data integration and analytics, essential for identifying records that refer to the same real-world entity across diverse sources. In practice, datasets often differ widely in structure, format,…

Databases · Computer Science 2026-02-09 Mohammad Hossein Moslemi , Amir Mousavi , Behshid Behkamal , Mostafa Milani

Metadata extraction is essential for cataloging and preserving datasets, enabling effective research discovery and reproducibility, especially given the current exponential growth in scientific research. While Masader (Alyafeai et al.,2021)…

Computation and Language · Computer Science 2025-09-19 Zaid Alyafeai , Maged S. Al-Shaibani , Bernard Ghanem

The FAIR principles are globally accepted guidelines for improved data management practices with the potential to align data spaces on a global scale. In practice, this is only marginally achieved through the different ways in which…

Databases · Computer Science 2025-05-15 Nicolas Blumenroehr , Philipp-Joachim Ost , Felix Kraus , Achim Streit

Computational physics increasingly depends on large simulation datasets generated by software that remains under active development for many years. In such settings, reproducibility requires not only well documented data but also explicit…

Computational Physics · Physics 2026-04-30 Markus Uehlein , Tobias Held , Christopher Seibel , Lukas G. Jonda , Baerbel Rethfeld , Sebastian T. Weber

Metal-organic frameworks (MOFs) are porous materials composed of metal ions and organic linkers. Due to their chemical diversity, MOFs can support a broad range of applications in chemical separations. However, the vast amount of structural…

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