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Large Language Models (LLMs) have revolutionized various sectors, including healthcare where they are employed in diverse applications. Their utility is particularly significant in the context of rare diseases, where data scarcity,…

Computation and Language · Computer Science 2024-08-20 Qiuhao Lu , Rui Li , Andrew Wen , Jinlian Wang , Liwei Wang , Hongfang Liu

Standardized patients (SPs) are indispensable for clinical skills training but remain expensive and difficult to scale. Although large language model (LLM)-based virtual standardized patients (VSPs) have been proposed as an alternative,…

Computation and Language · Computer Science 2026-03-24 Bingquan Zhang , Xiaoxiao Liu , Yuchi Wang , Lei Zhou , Qianqian Xie , Benyou Wang

Natural language processing (NLP) applications such as named entity recognition (NER) for low-resource corpora do not benefit from recent advances in the development of large language models (LLMs) where there is still a need for larger…

Computation and Language · Computer Science 2025-07-22 Jamil Zaghir , Mina Bjelogrlic , Jean-Philippe Goldman , Soukaïna Aananou , Christophe Gaudet-Blavignac , Christian Lovis

The field of clinical natural language processing has been advanced significantly since the introduction of deep learning models. The self-supervised representation learning and the transfer learning paradigm became the methods of choice in…

Computation and Language · Computer Science 2020-04-27 Andrey Kormilitzin , Nemanja Vaci , Qiang Liu , Alejo Nevado-Holgado

Facilitating cross-lingual transfer in multilingual language models remains a critical challenge. Towards this goal, we propose an embedding-based data augmentation technique called XITE. We start with unlabeled text from a low-resource…

Computation and Language · Computer Science 2026-04-28 Barah Fazili , Preethi Jyothi

The rapid advancements in Large Language Models (LLMs) have significantly expanded their applications, ranging from multilingual support to domain-specific tasks and multimodal integration. In this paper, we present OmniEvalKit, a novel…

Computation and Language · Computer Science 2024-12-10 Yi-Kai Zhang , Xu-Xiang Zhong , Shiyin Lu , Qing-Guo Chen , De-Chuan Zhan , Han-Jia Ye

Developing Named Entity Recognition (NER) systems for Indian languages has been a long-standing challenge, mainly owing to the requirement of a large amount of annotated clean training instances. This paper proposes an end-to-end framework…

Computation and Language · Computer Science 2021-11-24 Akshara Prabhakar , Gouri Sankar Majumder , Ashish Anand

There is an ongoing need for scalable tools to aid researchers in both retrospective and prospective standardization of discrete entity types -- such as disease names, cell types or chemicals -- that are used in metadata associated with…

Databases · Computer Science 2024-07-04 Rafael S. Gonçalves , Jason Payne , Amelia Tan , Carmen Benitez , Jamie Haddock , Robert Gentleman

Patients with low health literacy usually have difficulty understanding medical jargon and the complex structure of professional medical language. Although some studies are proposed to automatically translate expert language into…

Computation and Language · Computer Science 2024-02-09 Junyu Luo , Zifei Zheng , Hanzhong Ye , Muchao Ye , Yaqing Wang , Quanzeng You , Cao Xiao , Fenglong Ma

Existing medical reasoning benchmarks for vision-language models primarily focus on analyzing a patient's condition based on an image from a single visit. However, this setting deviates significantly from real-world clinical practice, where…

Computer Vision and Pattern Recognition · Computer Science 2025-09-30 Junyi Zhang , Jia-Chen Gu , Wenbo Hu , Yu Zhou , Robinson Piramuthu , Nanyun Peng

Cross-lingual entity linking (XEL) is the task of finding referents in a target-language knowledge base (KB) for mentions extracted from source-language texts. The first step of (X)EL is candidate generation, which retrieves a list of…

Computation and Language · Computer Science 2020-03-09 Shuyan Zhou , Shruti Rijhwani , John Wieting , Jaime Carbonell , Graham Neubig

The integration of Artificial Intelligence (AI), especially Large Language Models (LLMs), into the clinical diagnosis process offers significant potential to improve the efficiency and accessibility of medical care. While LLMs have shown…

Computation and Language · Computer Science 2024-10-15 Mingyu Derek Ma , Chenchen Ye , Yu Yan , Xiaoxuan Wang , Peipei Ping , Timothy S Chang , Wei Wang

We propose an efficient modeling framework for cross-lingual named entity recognition in semi-structured text data. Our approach relies on both knowledge distillation and consistency training. The modeling framework leverages knowledge from…

Computation and Language · Computer Science 2023-07-19 Sunisth Kumar , Davide Liu , Alexandre Boulenger

Biomedical entity linking maps textual mentions to concepts in structured knowledge bases such as UMLS or SNOMED CT. Most existing systems link each mention independently, using only the mention or its surrounding sentence. This ignores…

Computation and Language · Computer Science 2026-05-14 Adam Remaki , Xavier Tannier , Christel Gérardin

In this work, we introduce the Multiple Embedding Model for EHR (MEME), an approach that serializes multimodal EHR tabular data into text using pseudo-notes, mimicking clinical text generation. This conversion not only preserves better…

Computation and Language · Computer Science 2025-07-08 Simon A. Lee , Sujay Jain , Alex Chen , Kyoka Ono , Jennifer Fang , Akos Rudas , Jeffrey N. Chiang

The cross-lingual language models are typically pretrained with masked language modeling on multilingual text or parallel sentences. In this paper, we introduce denoising word alignment as a new cross-lingual pre-training task.…

Computation and Language · Computer Science 2021-09-14 Zewen Chi , Li Dong , Bo Zheng , Shaohan Huang , Xian-Ling Mao , Heyan Huang , Furu Wei

Multimodal representation learning has demonstrated remarkable potential in enabling models to process and integrate diverse data modalities, such as text and images, for improved understanding and performance. While the medical domain can…

Computer Vision and Pattern Recognition · Computer Science 2025-03-04 Shuvendu Roy , Franklin Ogidi , Ali Etemad , Elham Dolatabadi , Arash Afkanpour

Biomedical entity linking is the task of identifying mentions of biomedical concepts in text documents and mapping them to canonical entities in a target thesaurus. Recent advancements in entity linking using BERT-based models follow a…

Computation and Language · Computer Science 2021-03-10 Rajarshi Bhowmik , Karl Stratos , Gerard de Melo

Cross-lingual named entity recognition (NER) aims to train an NER system that generalizes well to a target language by leveraging labeled data in a given source language. Previous work alleviates the data scarcity problem by translating…

Computation and Language · Computer Science 2023-05-25 Tingting Ma , Qianhui Wu , Huiqiang Jiang , Börje F. Karlsson , Tiejun Zhao , Chin-Yew Lin

Using model weights pretrained on a high-resource language as a warm start can reduce the need for data and compute to obtain high-quality language models for other, especially low-resource, languages. However, if we want to use a new…

Computation and Language · Computer Science 2024-04-05 Konstantin Dobler , Gerard de Melo