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Accurate recognition of biomedical named entities is critical for medical information extraction and knowledge discovery. However, existing methods often struggle with nested entities, entity boundary ambiguity, and cross-lingual…
Cross-lingual biomedical entity linking (BEL) maps mentions in any language to unique identifiers in a biomedical knowledge base (KB), supporting clinical and biomedical NLP applications. However, expert-annotated training data for BEL are…
Despite their popularity in non-English NLP, multilingual language models often underperform monolingual ones due to inter-language competition for model parameters. We propose Cross-lingual Expert Language Models (X-ELM), which mitigate…
State-of-the-art deep learning entity linking methods rely on extensive human-labelled data, which is costly to acquire. Current datasets are limited in size, leading to inadequate coverage of biomedical concepts and diminished performance…
Motivation: State-of-the-art biomedical named entity recognition (BioNER) systems often require handcrafted features specific to each entity type, such as genes, chemicals and diseases. Although recent studies explored using neural network…
Injecting external domain-specific knowledge (e.g., UMLS) into pretrained language models (LMs) advances their capability to handle specialised in-domain tasks such as biomedical entity linking (BEL). However, such abundant expert knowledge…
Multi-table entity matching (MEM) addresses the limitations of dual-table approaches by enabling simultaneous identification of equivalent entities across multiple data sources without unique identifiers. However, existing methods relying…
Recent advances in multimodal large language models have enabled unified processing of visual and textual inputs, offering promising applications in general-purpose medical AI. However, their ability to generalize compositionally across…
Large language models (LLMs) are transforming the ways the general public accesses and consumes information. Their influence is particularly pronounced in pivotal sectors like healthcare, where lay individuals are increasingly appropriating…
Expressing universal semantics common to all languages is helpful in understanding the meanings of complex and culture-specific sentences. The research theme underlying this scenario focuses on learning universal representations across…
For languages with no annotated resources, transferring knowledge from rich-resource languages is an effective solution for named entity recognition (NER). While all existing methods directly transfer from source-learned model to a target…
With the increasing application of large language models (LLMs) in the medical domain, evaluating these models' performance using benchmark datasets has become crucial. This paper presents a comprehensive survey of various benchmark…
Multimodal Entity Linking (MEL) is a crucial task that aims at linking ambiguous mentions within multimodal contexts to the referent entities in a multimodal knowledge base, such as Wikipedia. Existing methods focus heavily on using complex…
The training of large language models (LLMs) necessitates substantial data and computational resources, and updating outdated LLMs entails significant efforts and resources. While numerous model editing techniques (METs) have emerged to…
Cross-lingual Entity Linking (XEL) aims to ground entity mentions written in any language to an English Knowledge Base (KB), such as Wikipedia. XEL for most languages is challenging, owing to limited availability of resources as…
Multimodal Entity Linking (MEL) aims to associate textual and visual mentions with entities in a multimodal knowledge graph. Despite its importance, current methods face challenges such as incomplete contextual information, coarse…
Despite significant advancements in medical vision-language pre-training, existing methods have largely overlooked the inherent linguistic complexity and imbalanced isssue within medical reports, as well as the complex cross-modality…
Cross-lingual pre-training has achieved great successes using monolingual and bilingual plain text corpora. However, most pre-trained models neglect multilingual knowledge, which is language agnostic but comprises abundant cross-lingual…
Motivation: Biomedical named-entity normalization involves connecting biomedical entities with distinct database identifiers in order to facilitate data integration across various fields of biology. Existing systems for biomedical named…
Clinical studies often require understanding elements of a patient's narrative that exist only in free text clinical notes. To transform notes into structured data for downstream use, these elements are commonly extracted and normalized to…