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Accurate interpretation of Magnetic Resonance Imaging scans in clinical systems is based on a precise understanding of image contrast. This contrast is primarily governed by acquisition parameters, such as echo time and repetition time,…

Computer Vision and Pattern Recognition · Computer Science 2025-08-04 Mehmet Yigit Avci , Pedro Borges , Paul Wright , Mehmet Yigitsoy , Sebastien Ourselin , Jorge Cardoso

Perfusion-weighted magnetic resonance imaging (MRI) is an imaging technique that allows one to measure tissue perfusion in an organ of interest through the injection of an intravascular paramagnetic contrast agent (CA). Due to a preference…

Computer Vision and Pattern Recognition · Computer Science 2017-08-28 Cagdas Ulas , Christine Preibisch , Jonathan Sperl , Thomas Pyka , Jayashree Kalpathy-Cramer , Bjoern Menze

Magnetic resonance imaging (MRI) offers superb-quality images, but its accessibility is limited by high costs, posing challenges for patients requiring longitudinal care. Low-field MRI provides affordable imaging with low-cost devices but…

Image and Video Processing · Electrical Eng. & Systems 2025-05-06 Tal Oved , Beatrice Lena , Chloé F. Najac , Sheng Shen , Matthew S. Rosen , Andrew Webb , Efrat Shimron

We introduce a model-based reconstruction framework with deep learned (DL) and smoothness regularization on manifolds (STORM) priors to recover free breathing and ungated (FBU) cardiac MRI from highly undersampled measurements. The DL…

Machine Learning · Computer Science 2018-07-12 Sampurna Biswas , Hemant K. Aggarwal , Sunrita Poddar , Mathews Jacob

In cardiac magnetic resonance (CMR) imaging, a 3D high-resolution segmentation of the heart is essential for detailed description of its anatomical structures. However, due to the limit of acquisition duration and respiratory/cardiac…

Image and Video Processing · Electrical Eng. & Systems 2021-07-09 Shuo Wang , Chen Qin , Nicolo Savioli , Chen Chen , Declan O'Regan , Stuart Cook , Yike Guo , Daniel Rueckert , Wenjia Bai

Fast and accurate reconstruction of magnetic resonance (MR) images from under-sampled data is important in many clinical applications. In recent years, deep learning-based methods have been shown to produce superior performance on MR image…

Image and Video Processing · Electrical Eng. & Systems 2021-03-12 Pengfei Guo , Puyang Wang , Jinyuan Zhou , Shanshan Jiang , Vishal M. Patel

Low-field magnetic resonance imaging (MRI) offers a cost-effective alternative for medical imaging in resource-limited settings. However, its widespread adoption is hindered by two key challenges: prolonged scan times and reduced image…

Computer Vision and Pattern Recognition · Computer Science 2026-03-17 Daniel Tweneboah Anyimadu , Mohammed Abdalla , Mohammed M. Abdelsamea , Ahmed Karam Eldaly

Accelerated magnetic resonance imaging involves reconstructing fully sampled images from undersampled k-space measurements. Current state-of-the-art approaches have mainly focused on either end-to-end supervised training inspired by…

Image and Video Processing · Electrical Eng. & Systems 2025-02-25 Xinzhe Luo , Yingzhen Li , Chen Qin

Purpose: Visualization of subcortical gray matter is essential in neuroscience and clinical practice, particularly for disease understanding and surgical planning.While multi-inversion time (multi-TI) T$_1$-weighted (T$_1$-w) magnetic…

Image and Video Processing · Electrical Eng. & Systems 2025-12-09 Savannah P. Hays , Lianrui Zuo , Anqi Feng , Yihao Liu , Blake E. Dewey , Jiachen Zhuo , Ellen M. Mowry , Scott D. Newsome , Jerry L. Prince , Aaron Carass

Purpose: To develop a self-supervised scan-specific deep learning framework for reconstructing accelerated multiparametric quantitative MRI (qMRI). Methods: We propose REFINE-MORE (REference-Free Implicit NEural representation with MOdel…

Medical Physics · Physics 2025-08-05 Ruimin Feng , Albert Jang , Xingxin He , Fang Liu

Purpose: To develop a reconstruction framework for 3D real-time cine cardiovascular magnetic resonance (CMR) from highly undersampled data without requiring fully sampled training datasets. Methods: We developed a multi-dynamic low-rank…

Image and Video Processing · Electrical Eng. & Systems 2025-12-08 Chong Chen , Marc Vornehm , Zhenyu Bu , Preethi Chandrasekaran , Muhammad A. Sultan , Syed M. Arshad , Yingmin Liu , Yuchi Han , Rizwan Ahmad

Recently, data-driven techniques have demonstrated remarkable effectiveness in addressing challenges related to MR imaging inverse problems. However, these methods still exhibit certain limitations in terms of interpretability and…

Computer Vision and Pattern Recognition · Computer Science 2023-09-19 Huayu Wang , Chen Luo , Taofeng Xie , Qiyu Jin , Guoqing Chen , Zhuo-Xu Cui , Dong Liang

Magnetic resonance imaging (MRI) is increasingly utilized for image-guided radiotherapy due to its outstanding soft-tissue contrast and lack of ionizing radiation. However, geometric distortions caused by gradient nonlinearity (GNL) limit…

In clinical imaging, magnetic resonance (MR) image volumes are often acquired as stacks of 2D slices with decreased scan times, improved signal-to-noise ratio, and image contrasts unique to 2D MR pulse sequences. While this is sufficient…

Computer Vision and Pattern Recognition · Computer Science 2026-03-09 Samuel W. Remedios , Shuwen Wei , Shuo Han , Jinwei Zhang , Aaron Carass , Kurt G. Schilling , Dzung L. Pham , Jerry L. Prince , Blake E. Dewey

This paper proposes to learn analysis transform network for dynamic magnetic resonance imaging (LANTERN) with small dataset. Integrating the strength of CS-MRI and deep learning, the proposed framework is highlighted in three components:…

Image and Video Processing · Electrical Eng. & Systems 2019-08-27 Shanshan Wang , Yanxia Chen , Taohui Xiao , Ziwen Ke , Qiegen Liu , Hairong Zheng

Dynamic Magnetic Resonance Imaging (MRI) is a crucial non-invasive method used to capture the movement of internal organs and tissues, making it a key tool for medical diagnosis. However, dynamic MRI faces a major challenge: long…

Image and Video Processing · Electrical Eng. & Systems 2024-09-20 Tamir Shor , Chaim Baskin , Alex Bronstein

Accelerated MRI reconstructs images of clinical anatomies from sparsely sampled signal data to reduce patient scan times. While recent works have leveraged deep learning to accomplish this task, such approaches have often only been explored…

Image and Video Processing · Electrical Eng. & Systems 2022-12-01 Michael S. Yao , Michael S. Hansen

Currently, the deep neural network is the mainstream for machine learning, and being actively developed for biomedical imaging applications with an increasing emphasis on tomographic reconstruction for MRI, CT, and other imaging modalities.…

Medical Physics · Physics 2018-05-31 Qing Lyu , Tao Xu , Hongming Shan , Ge Wang

Accelerated cardiac cine MRI requires reconstructing spatiotemporal images from highly undersampled k-space data. Implicit neural representations (INRs) enable scan-specific reconstruction without large training datasets, but encode content…

Image and Video Processing · Electrical Eng. & Systems 2026-03-09 Wenqi Huang , Veronika Spieker , Nil Stolt-Ansó , Natascha Niessen , Maik Dannecker , Sevgi Gokce Kafali , Sila Kurugol , Julia A. Schnabel , Daniel Rueckert

Magnetic Resonance Imaging (MRI) is a critical tool in modern medical diagnostics, yet its prolonged acquisition time remains a critical limitation, especially in time-sensitive clinical scenarios. While undersampling strategies can…

Image and Video Processing · Electrical Eng. & Systems 2025-10-09 Mohammed Alsubaie , Wenxi Liu , Linxia Gu , Ovidiu C. Andronesi , Sirani M. Perera , Xianqi Li
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