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We propose to study homomorphisms of connectome graphs. Homomorphisms can be studied as sequences of elementary homomorphisms - folds, which identify pairs of vertices. Several fold types are defined. Initial computation results for some…

Neurons and Cognition · Quantitative Biology 2014-12-10 Peteris Daugulis

Heterogeneous graphs (HGs) also known as heterogeneous information networks have become ubiquitous in real-world scenarios; therefore, HG embedding, which aims to learn representations in a lower-dimension space while preserving the…

Social and Information Networks · Computer Science 2020-12-02 Xiao Wang , Deyu Bo , Chuan Shi , Shaohua Fan , Yanfang Ye , Philip S. Yu

Let the join of two graphs be the union of two disjoint graphs connected by $j$ edges in a one-to-one manner. In previous work by Gyurov and Pinzon, which generalized the results of Badura and Rara, the determinant of the adjacency matrix…

Combinatorics · Mathematics 2025-01-10 Daniel Pinzon , Daniel Pragel , Joshua Roberts

Node-link diagrams are a popular method for representing graphs that capture relationships between individuals, businesses, proteins, and telecommunication endpoints. However, node-link diagrams may fail to convey insights regarding graph…

Social and Information Networks · Computer Science 2023-09-20 Paul Rosen , Mustafa Hajij , Bei Wang

In recent work by Johnson et al. (2022), a framework was described for the study of graph problems over classes specified by omitting each of a finite set of graphs as subgraphs. If a problem falls into the framework then its computational…

Computational Complexity · Computer Science 2025-03-17 Tala Eagling-Vose , Barnaby Martin , Daniel Paulusma , Siani Smith

In this survey, we explore recent literature on finding the cores of higher graphs using geometric and topological means. We study graphs, hypergraphs, and simplicial complexes, all of which are models of higher graphs. We study the notion…

History and Overview · Mathematics 2025-06-30 Inés García-Redondo , Claudia Landi , Sarah Percival , Anda Skeja , Bei Wang , Ling Zhou

Two important invariants of directed graphs, namely magnitude homology and path homology, have recently been shown to be intimately connected: there is a 'magnitude-path spectral sequence' or 'MPSS' in which magnitude homology appears as…

Algebraic Topology · Mathematics 2026-04-28 Richard Hepworth , Emily Roff

The dynamics of large complex systems are predominately modeled through pairwise interactions, the principle underlying structure being a network of the form of a digraph or quiver. Significant success has been obtained in applying the…

Algebraic Topology · Mathematics 2025-09-10 Matthew Burfitt , Jie Wu , Stephen S. -T. Yau , Shing-Tung Yau

This paper focuses on developing an efficient algorithm for analyzing a directed network (graph) from a topological viewpoint. A prevalent technique for such topological analysis involves computation of homology groups and their…

Computational Geometry · Computer Science 2020-01-29 Tamal K. Dey , Tianqi Li , Yusu Wang

We define persistent homology groups over any set of spaces which have inclusions defined so that the corresponding directed graph between the spaces is acyclic, as well as along any subgraph of this directed graph. This method…

Computational Geometry · Computer Science 2019-06-20 Erin Wolf Chambers , David Letscher

Given graphs $H$ and $G$, possibly with vertex-colors, a homomorphism is a function $f:V(H)\to V(G)$ that preserves colors and edges. Many interesting counting problems (e.g., subgraph and induced subgraph counts) are finite linear…

Computational Complexity · Computer Science 2023-05-09 Radu Curticapean

Graph similarity computation is one of the core operations in many graph-based applications, such as graph similarity search, graph database analysis, graph clustering, etc. Since computing the exact distance/similarity between two graphs…

Machine Learning · Computer Science 2021-05-18 Yunsheng Bai , Hao Ding , Yizhou Sun , Wei Wang

We show that if the two parts of a finite bipartite graph have the same degree sequence, then there is a bipartite graph, with the same degree sequences, which is symmetric, in that it has an involutive graph automorphism that interchanges…

Combinatorics · Mathematics 2014-07-07 Grant Cairns , Stacey Mendan

We investigate which topological spaces can be constructed as topological realisations of higher-rank graphs. We describe equivalence relations on higher-rank graphs for which the quotient is again a higher-rank graph, and show that…

Operator Algebras · Mathematics 2016-06-09 Alex Kumjian , David Pask , Aidan Sims , Michael F. Whittaker

An isometric embedding of a graph into a metric space is an embedding of the vertices such that the smallest number of edges connecting any two vertices equals to the distance in the metric space between the images. In this paper, we study…

Metric Geometry · Mathematics 2018-04-20 Shiquan Ren

The notion of graph covers (also referred to as locally bijective homomorphisms) plays an important role in topological graph theory and has found its computer science applications in models of local computation. For a fixed target graph…

Discrete Mathematics · Computer Science 2025-02-28 Jan Bok , Jiří Fiala , Nikola Jedličková , Jan Kratochvíl , Micheala Seifrtová

In this paper we determine all singular endomorphisms of the Hamming graph and other related graphs. The Hamming graph has vertices $\mathbb{Z}^{m}_n$ where two vertices are adjacent, if their Hamming distance is $1$. We show that its…

Combinatorics · Mathematics 2016-02-09 Artur Schaefer

A new method is given for computing generators of the homology groups with integer coefficients for any finite $T_0$-space. An important role in this method is played by irreducible cycles which are defined here and give rise to continuous…

Algebraic Topology · Mathematics 2018-11-13 Patrick Erik Bradley

A spectral sequence calculating the homology groups of some spaces of maps equivariant under compact group actions is described. For the main example, we calculate the rational homology groups of spaces of even and odd maps $S^m \to S^M$,…

Algebraic Topology · Mathematics 2021-07-01 Victor Vassiliev

Topological data analysis is an emerging area in exploratory data analysis and data mining. Its main tool, persistent homology, has become a popular technique to study the structure of complex, high-dimensional data. In this paper, we…

Graphics · Computer Science 2017-10-04 Mustafa Hajij , Bei Wang , Carlos Scheidegger , Paul Rosen