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Swimming micro-organisms such as bacteria or spermatozoa are typically found in dense suspensions, and exhibit collective modes of locomotion qualitatively different from that displayed by isolated cells. In the dilute limit where…

Biological Physics · Physics 2010-05-02 Sebastien Michelin , Eric Lauga

Carbon dioxide is a chemically active molecule that plays a vital role in Earth's ecosphere. CO$_2$ affects the acidity of seawater and has multiple negative effects on marine organisms. It is also a fundamental component of the…

Other Quantitative Biology · Quantitative Biology 2024-08-19 Ugo Bardi

Interaction between atmospheric mid-latitude flow and wind-driven ocean circulation is studied coupling two idealized low-order spectral models. The barotropic Charney-DeVore model with three components simulates a bimodal mid-latitude…

Atmospheric and Oceanic Physics · Physics 2011-06-10 Oliver Bothe

Systems of motile microorganisms exhibit a multitude of collective phenomena, including motility-induced phase separation and turbulence. Sensing of the environment and adaptation of movement plays an essential role in the emergent…

Soft Condensed Matter · Physics 2024-06-26 Segun Goh , Elmar Westphal , Roland G. Winkler , Gerhard Gompper

Motivated by the important role of the ocean in the Earth climate system, here we investigate possible scenarios of ocean circulations on exoplanets using a one-layer shallow water ocean model. Specifically, we investigate how planetary…

Earth and Planetary Astrophysics · Physics 2018-09-06 Weiwen Ji , Ru Chen , Jun Yang

Ocean planets are volatile rich planets, not present in our Solar System, which are thought to be dominated by deep, global oceans. This results in the formation of high-pressure water ice, separating the planetary crust from the liquid…

Earth and Planetary Astrophysics · Physics 2015-07-14 D. Kitzmann , Y. Alibert , M. Godolt , J. L. Grenfell , K. Heng , A. B. C. Patzer , H. Rauer , B. Stracke , P. von Paris

Micron-sized self-propelled (active) particles can be considered as model systems for characterizing more complex biological organisms like swimming bacteria or motile cells. We produce asymmetric microswimmers by soft lithography and study…

Evolution has fascinated quantitative and physical scientists for decades: how can the random process of mutation, recombination, and duplication of genetic information generate the diversity of life? What determines the rate of evolution?…

Populations and Evolution · Quantitative Biology 2018-04-23 Richard A. Neher , Aleksandra M. Walczak

We reveal that the mechanical pulsation of locally synchronised particles is a generic route to propagate deformation waves. We consider a model of dense repulsive particles whose activity drives periodic change in size of each individual.…

Soft Condensed Matter · Physics 2023-12-12 Yiwei Zhang , Étienne Fodor

The history of the Earth has been marked by major ecological transitions, driven by metabolic innovation, that radically reshaped the composition of the oceans and atmosphere. The nature and magnitude of the earliest transitions, hundreds…

Populations and Evolution · Quantitative Biology 2020-06-12 Boris Sauterey , Benjamin Charnay , Antonin Affholder , Stéphane Mazevet , Régis Ferrière

The locomotion of flexible membrane-like organisms on top of curved surfaces appears in different contexts and scales. Still, such dynamics have not yet been quantitatively modeled and no realization of such motion in manmade systems has…

Soft Condensed Matter · Physics 2024-02-27 Omri Y. Cohen , Yael Klein , Eran Sharon

Motility is a fundamental survival strategy of bacteria to navigate porous environments. Swimming cells thrive in quiescent wetlands and sediments at the bottom of the marine water column, where they mediate many essential biogeochemical…

Soft Condensed Matter · Physics 2022-01-11 Amin Dehkharghani , Nicolas Waisbord , Jeffrey S. Guasto

The exceptional reactivity of animal collectives to predatory attacks is thought to be due to rapid, but local, transfer of information between group members. These groups turn together in unison and produce escape waves. However, it is not…

Populations and Evolution · Quantitative Biology 2015-06-05 James Herbert-Read , Jerome Buhl , Feng Hu , Ashley Ward , David Sumpter

Planktonic organisms, despite their passive drift in the ocean, exhibit complex responses to fluid flow, including escape behaviors and larval settlement detection. But what flow signals can they perceive? This paper addresses this question…

Fluid Dynamics · Physics 2024-11-27 Christophe Eloy

A model is proposed to explain the observed correlation between monthly fluctuations in atmospheric CO2 concentrations and temperatures. The model relies on the oceans being in a temperature-dependent equilibrium with the atmosphere. When…

Atmospheric and Oceanic Physics · Physics 2008-02-22 Francois Ouellette

Suspensions of swimming micro-organisms are known to undergo intricate collective dynamics as a result of hydrodynamic and collision interactions. Micro-swimmers, such as bacteria and micro-algae, naturally live and have evolved in complex…

Fluid Dynamics · Physics 2025-10-31 Yasser Almoteri , Enkeleida Lushi

Despite their importance in many biological, ecological and physical processes, microorganismal fluid flows under tight confinement have not been investigated experimentally. Strong screening of Stokelets in this geometry suggests that the…

Biological Physics · Physics 2019-12-18 Raphaël Jeanneret , Dmitri O. Pushkin , Marco Polin

The transport of reactive species brought about by ions traversing tissue-like medium is analysed analytically. Secondary electrons ejected by ions are capable of ionizing other molecules; the transport of these generations of electrons is…

Biological Physics · Physics 2015-09-02 Eugene Surdutovich , Andrey V. Solov'yov

Many microorganisms swim by performing larger non-reciprocal shape deformations that are initiated locally by molecular motors. However, it remains unclear how decentralized shape control determines the movement of the entire organism.…

Biological Physics · Physics 2025-05-14 Benedikt Hartl , Michael Levin , Andreas Zöttl

Swimmers and self-propelled particles are physical models for the collective behaviour and motility of a wide variety of living systems, such as bacteria colonies, bird flocks and fish schools. Such artificial active materials are amenable…