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Semi-supervised learning (SSL) for medical image segmentation is a challenging yet highly practical task, which reduces reliance on large-scale labeled dataset by leveraging unlabeled samples. Among SSL techniques, the weak-to-strong…

Computer Vision and Pattern Recognition · Computer Science 2024-10-18 Shiao Xie , Hongyi Wang , Ziwei Niu , Hao Sun , Shuyi Ouyang , Yen-Wei Chen , Lanfen Lin

Systematic chemical names, such as IUPAC-style nomenclature for metal-organic frameworks (MOFs), contain rich structural and compositional information in a standardized textual format. Here we introduce ReadMOF, which is, to our knowledge,…

Machine Learning · Computer Science 2026-04-14 Kewei Zhu , Cameron Wilson , Bartosz Mazur , Yi Li , Ashleigh M. Chester , Peyman Z. Moghadam

The rapid advancement of generative artificial intelligence has enabled models capable of producing complex textual and visual outputs; however, their decision-making processes remain largely opaque, limiting trust and accountability in…

Artificial Intelligence · Computer Science 2026-02-03 Zeinab Dehghani

Peptides, short chains of amino acid residues, play a vital role in numerous biological processes by interacting with other target molecules, offering substantial potential in drug discovery. In this work, we present PepFlow, the first…

Biomolecules · Quantitative Biology 2024-06-04 Jiahan Li , Chaoran Cheng , Zuofan Wu , Ruihan Guo , Shitong Luo , Zhizhou Ren , Jian Peng , Jianzhu Ma

Medical imaging diagnosis increasingly relies on Machine Learning (ML) models. This is a task that is often hampered by severely imbalanced datasets, where positive cases can be quite rare. Their use is further compromised by their limited…

Machine Learning · Computer Science 2024-01-26 Yumnah Hasan , Allan de Lima , Fatemeh Amerehi , Darian Reyes Fernandez de Bulnes , Patrick Healy , Conor Ryan

Current Artificial Intelligence (AI) systems are frequently built around monolithic models that entangle perception, reasoning, and decision-making, a design that often conflicts with established software architecture principles. Large…

Software Engineering · Computer Science 2026-03-17 Nicolas Schuler , Vincenzo Scotti , Raffaela Mirandola

Multimodal emotion recognition in conversation (MERC) has garnered substantial research attention recently. Existing MERC methods face several challenges: (1) they fail to fully harness direct inter-modal cues, possibly leading to…

Computation and Language · Computer Science 2025-07-01 Jiang Li , Xiaoping Wang , Zhigang Zeng

We propose a new type of representation learning method that models words, phrases and sentences seamlessly. Our method does not depend on word segmentation and any human-annotated resources (e.g., word dictionaries), yet it is very…

Computation and Language · Computer Science 2019-05-30 Geewook Kim , Kazuki Fukui , Hidetoshi Shimodaira

Facial Image inpainting aim is to restore the missing or corrupted regions in face images while preserving identity, structural consistency and photorealistic image quality, a task specifically created for photo restoration. Though there…

Computer Vision and Pattern Recognition · Computer Science 2026-02-17 Abhigyan Bhattacharya , Hiranmoy Roy , Debotosh Bhattacharjee

Methods for automatic chemical retrosynthesis have found recent success through the application of models traditionally built for natural language processing, primarily through transformer neural networks. These models have demonstrated…

Machine Learning · Computer Science 2025-06-04 Sean Current , Ziqi Chen , Daniel Adu-Ampratwum , Xia Ning , Srinivasan Parthasarathy

Molecule-and-text cross-modal representation learning has emerged as a promising direction for enhancing the quality of molecular representation, thereby improving performance in various scientific fields. However, most approaches employ a…

Quantitative Methods · Quantitative Biology 2025-03-04 Yikun Zhang , Geyan Ye , Chaohao Yuan , Bo Han , Long-Kai Huang , Jianhua Yao , Wei Liu , Yu Rong

Semantic segmentation is a critical task in computer vision aiming to identify and classify individual pixels in an image, with numerous applications in for example autonomous driving and medical image analysis. However, semantic…

Computer Vision and Pattern Recognition · Computer Science 2024-11-18 Halil Ibrahim Aysel , Xiaohao Cai , Adam Prügel-Bennett

Emerging large-scale text-to-image generative models, e.g., Stable Diffusion (SD), have exhibited overwhelming results with high fidelity. Despite the magnificent progress, current state-of-the-art models still struggle to generate images…

Computer Vision and Pattern Recognition · Computer Science 2024-07-16 Yumeng Li , Margret Keuper , Dan Zhang , Anna Khoreva

The recent adoption of artificial intelligence in robotics has driven the development of algorithms that enable autonomous systems to adapt to complex social environments. In particular, safe and efficient social navigation is a key…

Symmetry reduction is a well-known approach for alleviating the state explosion problem in model checking. Automatically identifying symmetries in concurrent systems, however, is computationally expensive. We propose a symbolic framework…

Logic in Computer Science · Computer Science 2015-10-30 Anthony W. Lin , Truong Khanh Nguyen , Philipp Rümmer , Jun Sun

Word embedding (WE) techniques are advanced textual semantic representation models oriented from the natural language processing (NLP) area. Inspired by their effectiveness in facilitating various NLP tasks, more and more researchers…

Software Engineering · Computer Science 2025-05-26 Xiaohan Chen , Weiqin Zou , Lianyi Zhi , Qianshuang Meng , Jingxuan Zhang

The de novo generation of drug-like molecules capable of inducing desirable phenotypic changes is receiving increasing attention. However, previous methods predominantly rely on expression profiles to guide molecule generation, but overlook…

Biomolecules · Quantitative Biology 2025-06-04 Hui Liu , Shiye Tian , Xuejun Liu

One of the key issues in facial expression recognition in the wild (FER-W) is that curating large-scale labeled facial images is challenging due to the inherent complexity and ambiguity of facial images. Therefore, in this paper, we propose…

Computer Vision and Pattern Recognition · Computer Science 2023-03-15 Jiyong Moon , Seongsik Park

In this work, we propose a simple transformer-based baseline for multimodal molecular representation learning, integrating three distinct modalities: SMILES strings, 2D graph representations, and 3D conformers of molecules. A key aspect of…

Machine Learning · Computer Science 2024-10-25 Andrei Manolache , Dragos Tantaru , Mathias Niepert

Although text-to-image (T2I) models exhibit remarkable generation capabilities, they frequently fail to accurately bind semantically related objects or attributes in the input prompts; a challenge termed semantic binding. Previous…

Computer Vision and Pattern Recognition · Computer Science 2024-11-12 Taihang Hu , Linxuan Li , Joost van de Weijer , Hongcheng Gao , Fahad Shahbaz Khan , Jian Yang , Ming-Ming Cheng , Kai Wang , Yaxing Wang