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Current Continual Knowledge Graph Embedding (CKGE) methods primarily rely on translation-based embedding approaches, leveraging previously acquired knowledge to initialize new facts. While these methods often integrate fine-tuning or…

Information Retrieval · Computer Science 2025-08-29 Xinyan Wang , Jinshuo Liu , Kaijian Xie , Meng Wang , Cheng Bi , Juan Deng , Jeff Pan

Knowledge graphs (KGs) are the key components of various natural language processing applications. To further expand KGs' coverage, previous studies on knowledge graph completion usually require a large number of training instances for each…

Computation and Language · Computer Science 2018-08-29 Wenhan Xiong , Mo Yu , Shiyu Chang , Xiaoxiao Guo , William Yang Wang

The advent of large language models (LLMs) has revolutionized the integration of knowledge graphs (KGs) in biomedical and cognitive sciences, overcoming limitations in traditional machine learning methods for capturing intricate semantic…

Artificial Intelligence · Computer Science 2025-10-09 Ali Sarabadani , Kheirolah Rahsepar Fard

Recent years have seen a rapid growth of utilizing graph neural networks (GNNs) in the biomedical domain for tackling drug-related problems. However, like any other deep architectures, GNNs are data hungry. While requiring labels in real…

Biological Physics · Physics 2022-05-03 Mengying Sun , Jing Xing , Huijun Wang , Bin Chen , Jiayu Zhou

The recent proliferation of knowledge graphs (KGs) coupled with incomplete or partial information, in the form of missing relations (links) between entities, has fueled a lot of research on knowledge base completion (also known as relation…

Machine Learning · Computer Science 2019-06-05 Deepak Nathani , Jatin Chauhan , Charu Sharma , Manohar Kaul

Knowledge Graph Embeddings (KGEs) have shown promising performance on link prediction tasks by mapping the entities and relations from a knowledge graph into a geometric space (usually a vector space). Ultimately, the plausibility of the…

Machine Learning · Computer Science 2020-10-20 Mojtaba Nayyeri , Chengjin Xu , Jens Lehmann , Sahar Vahdati

Knowledge graph completion (KGC), the task of predicting missing information based on the existing relational data inside a knowledge graph (KG), has drawn significant attention in recent years. However, the predictive power of KGC methods…

Computation and Language · Computer Science 2023-05-26 Weihang Zhang , Ovidiu Serban , Jiahao Sun , Yi-ke Guo

Graph contrastive learning (GCL) has emerged as a state-of-the-art strategy for learning representations of diverse graphs including social and biomedical networks. GCL widely uses stochastic graph topology augmentation, such as uniform…

Machine Learning · Computer Science 2024-02-22 Yucheng Wu , Leye Wang , Xiao Han , Han-Jia Ye

Knowledge Tracing (KT) aims to model a student's learning trajectory and predict performance on the next question. A key challenge is how to better represent the relationships among students, questions, and knowledge concepts (KCs).…

Artificial Intelligence · Computer Science 2026-01-26 Chi Yu , Hongyu Yuan , Zhiyi Duan

A knowledge graph (KG) is a data structure which represents entities and relations as the vertices and edges of a directed graph with edge types. KGs are an important primitive in modern machine learning and artificial intelligence.…

Artificial Intelligence · Computer Science 2021-10-20 Michael R. Douglas , Michael Simkin , Omri Ben-Eliezer , Tianqi Wu , Peter Chin , Trung V. Dang , Andrew Wood

\textit{Knowledge-aware} recommendation methods (KGR) based on \textit{graph neural networks} (GNNs) and \textit{contrastive learning} (CL) have achieved promising performance. However, they fall short in modeling fine-grained user…

Information Retrieval · Computer Science 2024-03-26 Taotian Pang , Xingyu Lou , Fei Zhao , Zhen Wu , Kuiyao Dong , Qiuying Peng , Yue Qi , Xinyu Dai

Knowledge graphs (KGs) serve as a vital backbone for a wide range of AI applications, including natural language understanding and recommendation. A promising yet underexplored direction is numerical reasoning over KGs, which involves…

Artificial Intelligence · Computer Science 2026-04-21 Ming Yin , Zongsheng Cao , Qiqing Xia , Chenyang Tu , Neng Gao

Many mathematical models have been leveraged to design embeddings for representing Knowledge Graph (KG) entities and relations for link prediction and many downstream tasks. These mathematically-inspired models are not only highly scalable…

Artificial Intelligence · Computer Science 2023-09-25 Xiou Ge , Yun-Cheng Wang , Bin Wang , C. -C. Jay Kuo

Knowledge Graphs (KGs) are widely employed in artificial intelligence applications, such as question-answering and recommendation systems. However, KGs are frequently found to be incomplete. While much of the existing literature focuses on…

Artificial Intelligence · Computer Science 2024-06-28 Sakher Khalil Alqaaidi , Krzysztof Kochut

The rapid expansion of genomic sequence data calls for new methods to achieve robust sequence representations. Existing techniques often neglect intricate structural details, emphasizing mainly contextual information. To address this, we…

Machine Learning · Computer Science 2023-12-08 Kacper Kapuśniak , Manuel Burger , Gunnar Rätsch , Amir Joudaki

Conventional representation learning algorithms for knowledge graphs (KG) map each entity to a unique embedding vector. Such a shallow lookup results in a linear growth of memory consumption for storing the embedding matrix and incurs high…

Computation and Language · Computer Science 2022-02-03 Mikhail Galkin , Etienne Denis , Jiapeng Wu , William L. Hamilton

In recent years, the use of edge information provided by knowledge graphs together with the advantages of higher-order connectivity in graph neural networks for recommendation systems has become an important research direction. However,…

Information Retrieval · Computer Science 2026-05-12 Zhifei Hu , Feng Xia

Graph anomaly detection is a popular and vital task in various real-world scenarios, which has been studied for several decades. Recently, many studies extending deep learning-based methods have shown preferable performance on graph anomaly…

Machine Learning · Computer Science 2025-05-13 Jing Ren , Mingliang Hou , Zhixuan Liu , Xiaomei Bai

Previous knowledge graph embedding approaches usually map entities to representations and utilize score functions to predict the target entities, yet they typically struggle to reason rare or emerging unseen entities. In this paper, we…

Computation and Language · Computer Science 2023-08-01 Peng Wang , Xin Xie , Xiaohan Wang , Ningyu Zhang

Drug-target interaction (DTI) prediction is crucial for drug development and repositioning. Methods using heterogeneous graph neural networks (HGNNs) for DTI prediction have become a promising approach, with attention-based models often…

Biomolecules · Quantitative Biology 2024-11-05 Junwei Hu , Michael Bewong , Selasi Kwashie , Wen Zhang , Vincent M. Nofong , Guangsheng Wu , Zaiwen Feng
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