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Motivated by recent observations that long-range connections (LRC) play a role in various brain phenomena, we have observed two distinct dynamical transitions in the activity of excitable media where waves propagate both between neighboring…

Disordered Systems and Neural Networks · Physics 2008-04-07 Sitabhra Sinha , Jari Saramaki , Kimmo Kaski

Non-particulate continuum descriptions allow for computationally efficient modeling of suspension flows at scales that are inaccessible to more detailed particulate approaches. It is well known that the presence of particles influences the…

Soft Condensed Matter · Physics 2013-11-13 Florian Janoschek , Jens Harting , Federico Toschi

Spatial distributions of heavy particles suspended in an incompressible isotropic and homogeneous turbulent flow are investigated by means of high resolution direct numerical simulations. In the dissipative range, it is shown that particles…

Chaotic Dynamics · Physics 2007-05-23 J. Bec , L. Biferale , M. Cencini , A. Lanotte , S. Musacchio , F. Toschi

We present a numerical analysis of the rheology of a suspension of red blood cells (RBCs) for different volume fractions in a wall-bounded, effectively inertialess, small amplitude oscillatory shear (SAOS) flow for a wide range of applied…

Fluid Dynamics · Physics 2024-04-08 Naoki Takeishi , Marco Edoardo Rosti , Naoto Yokoyama , Luca Brandt

The stochastic dynamics of tracers arising from hydrodynamic fluctuations in a driven electrolyte is studied using a self-consistent field-theory framework in all dimensions. A plethora of scaling behaviour that includes two distinct…

Soft Condensed Matter · Physics 2026-02-12 Ramin Golestanian

A chemotaxis-diffusion-convection coupling system for describing a form of buoyant convection in which the fluid develops convection cells and plume patterns will be investigated numerically in this study. Based on the two-dimensional…

Fluid Dynamics · Physics 2015-02-19 Yannick Deleuze , Chen-Yu Chiang , Marc Thiriet , Tony W. H. Sheu

Percolation theory has been largely used in the study of structural properties of complex networks such as the robustness, with remarkable results. Nevertheless, a purely topological description is not sufficient for a correct…

Statistical Mechanics · Physics 2016-08-31 Luca Dall'Asta

A unique pattern selection in the absolutely unstable regime of a driven, nonlinear, open-flow system is analyzed: The spatiotemporal structures of rotationally symmetric vortices that propagate downstream in the annulus of the rotating…

patt-sol · Physics 2009-10-30 P. Buechel , M. Luecke , D. Roth , R. Schmitz

Many of the intriguing properties of blood originate from its cellular nature. Bulk effects, such as viscosity, depend on the local shear rates and on the size of the vessels. While empirical descriptions of bulk rheology are available for…

Computational Engineering, Finance, and Science · Computer Science 2023-05-05 Gabor Zavodszky , Christian Spieker , Benjamin Czaja , Britt van Rooij

We present mesoscale numerical simulations of Rayleigh-B\'enard (RB) convection in a two-dimensional model emulsion. The systems under study are constituted of finite-size droplets, whose concentration Phi_0 is systematically varied from…

We study analytically and numerically the winding of a flux line around a columnar defect. Reflecting and absorbing boundary conditions apply to marginal or repulsive defects, respectively. In both cases, the winding angle distribution…

Condensed Matter · Physics 2009-10-28 Barbara Drossel , Mehran Kardar

Random walks (RW) of particles adsorbed in the internal walls of porous deposits produced by ballistic-type growth models are studied. The particles start at the external surface of the deposits and enter their pores, in order to simulate…

Statistical Mechanics · Physics 2015-06-17 F. D. A. Aarao Reis , Dung di Caprio

The crystallization of bundles in filament networks interacting via long-range repulsions in confinement is described by a phenomenological model. The model demonstrates the formation of the hexagonal crystalline order via the interplay of…

Soft Condensed Matter · Physics 2013-05-10 Zhenwei Yao , Monica Olvera de la Cruz

In this paper we consider mathematical modeling of the dynamics of self-organized patterning of spatially confined human embryonic stem cells (hESCs) treated with BMP4 (gastruloids) described in recent experimental works. In the first part…

Analysis of PDEs · Mathematics 2021-01-12 Prajakta Bedekar , Ilya Timofeyev , Aryeh Warmflash , Misha Perepelitsa

Bifurcations and branches in the microcirculation dramatically affect blood flow as they determine the spatiotemporal organization of red blood cells (RBCs). Such changes in vessel geometries can further influence the formation of a…

Vascular and non-vascular cells often form an interconnected network in vitro, similar to the early vascular bed of warm blooded embryos. Our time-lapse recordings show that the network forms by extending sprouts, i.e., multicellular linear…

Cell Behavior · Quantitative Biology 2009-11-13 Andras Szabo , Erica D. Perryn , Andras Czirok

Diffusion models (DMs) have emerged as the new state-of-the-art family of deep generative models. To gain deeper insights into the limitations of diffusion models in recommender systems, we investigate the fundamental structural disparities…

Information Retrieval · Computer Science 2025-04-11 Meng Yuan , Yutian Xiao , Wei Chen , Chu Zhao , Deqing Wang , Fuzhen Zhuang

In the field of liquid crystals, it is well-known that rod-like molecules interacting via long-range attractive interactions or short-range repulsive potentials can exhibit orientational order. In this work, we are interested in what would…

Soft Condensed Matter · Physics 2022-06-01 Xiaoyu Zheng , Obeng Appiagyei Addai , Peter Palffy-Muhoray

In order to grasp the features arising from cellular discreteness and individuality, in large parts of cell tissue modelling agent-based models are favoured. The subclass of off-lattice models allows for a physical motivation of the…

Biological Physics · Physics 2007-06-21 Gernot Schaller , Michael Meyer-Hermann

In this article we review classical and recent results in anomalous diffusion and provide mechanisms useful for the study of the fundamentals of certain processes, mainly in condensed matter physics, chemistry and biology. Emphasis will be…

Statistical Mechanics · Physics 2019-02-25 Fernando A. Oliveira , Rogelma M. S. Ferreira , Luciano C. Lapas , Mendeli H. Vainstein