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Clustering is a fundamental tool that has garnered significant interest across a wide range of applications including text analysis. To improve clustering accuracy, many researchers have incorporated background knowledge, typically in the…

Machine Learning · Computer Science 2026-01-19 Chaoqi Jia , Weihong Wu , Longkun Guo , Zhigang Lu , Chao Chen , Kok-Leong Ong

We study tight bounds and fast algorithms for LCLMs of several linear differential operators with polynomial coefficients. We analyze the arithmetic complexity of existing algorithms for LCLMs, as well as the size of their outputs. We…

Symbolic Computation · Computer Science 2013-06-19 Alin Bostan , Frédéric Chyzak , Ziming Li , Bruno Salvy

This paper describes a method to efficiently retrieve protein database sequences similar to a query sequence, while allowing for significant numbers of mutations. We call this method SEQR for SEQuence Retrieval. This approach increases the…

Genomics · Quantitative Biology 2018-11-05 David I. Hurwitz , Lianyi Han , Lewis Y. Geer

A new algorithm for efficient exact maximum likelihood decoding of polar codes (which may be CRC augmented), transmitted over the binary erasure channel, is presented. The algorithm applies a matrix triangulation process on a sparse polar…

Information Theory · Computer Science 2021-06-29 Yonatan Urman , David Burshtein

High-throughput neural network inference requires coordinating many optimization decisions, including parallel tiling, microkernel selection, and data layout. The product of these decisions forms a search space of programs which is…

Programming Languages · Computer Science 2025-05-06 Samuel J. Kaufman , René Just , Rastislav Bodik

Despite recent advances in automated machine learning, model selection is still a complex and computationally intensive process. For Gaussian processes (GPs), selecting the kernel is a crucial task, often done manually by the expert.…

Machine Learning · Computer Science 2022-10-24 Matthias Bitzer , Mona Meister , Christoph Zimmer

Polar codes have received increasing attention in the past decade, and have been selected for the next generation of wireless communication standard. Most research on polar codes has focused on codes constructed from a $2\times2$…

Hardware Architecture · Computer Science 2018-02-05 Gabriele Coppolino , Carlo Condo , Guido Masera , Warren J. Gross

A decoding algorithm for polar (sub)codes with binary $2^t\times 2^t$ polarization kernels is presented. It is based on the window processing (WP) method, which exploits the linear relationship of the polarization kernels and the Arikan…

Information Theory · Computer Science 2021-04-07 Grigorii Trofimiuk , Peter Trifonov

Multiple kernel learning algorithms are proposed to combine kernels in order to obtain a better similarity measure or to integrate feature representations coming from different data sources. Most of the previous research on such methods is…

Machine Learning · Computer Science 2012-07-03 Mehmet Gonen

In this paper we revisit the kernel density estimation problem: given a kernel $K(x, y)$ and a dataset of $n$ points in high dimensional Euclidean space, prepare a data structure that can quickly output, given a query $q$, a…

Data Structures and Algorithms · Computer Science 2020-11-16 Moses Charikar , Michael Kapralov , Navid Nouri , Paris Siminelakis

Designing categorical kernels is a major challenge for Gaussian process regression with continuous and categorical inputs. Despite previous studies, it is difficult to identify a preferred method, either because the evaluation metrics, the…

Machine Learning · Statistics 2025-10-03 Raphaël Carpintero Perez , Sébastien Da Veiga , Josselin Garnier

Optimizing deep learning models is generally performed in two steps: (i) high-level graph optimizations such as kernel fusion and (ii) low level kernel optimizations such as those found in vendor libraries. This approach often leaves…

Machine Learning · Computer Science 2021-03-08 Pratik Fegade , Tianqi Chen , Phillip B. Gibbons , Todd C. Mowry

Kernel-based approach to operator approximation for partial differential equations has been shown to be unconditionally stable for linear PDEs and numerically exhibit unconditional stability for non-linear PDEs. These methods have the same…

Numerical Analysis · Mathematics 2025-11-25 Andrew Christlieb , Sining Gong , Hyoseon Yang

Deep neural networks have recently achieved state of the art performance thanks to new training algorithms for rapid parameter estimation and new regularization methods to reduce overfitting. However, in practice the network architecture…

Machine Learning · Computer Science 2016-03-04 Minyoung Kim , Luca Rigazio

In this article, we propose a new fast nearest neighbor search algorithm, based on vector quantization. Like many other branch and bound search algorithms [1,10], a preprocessing recursively partitions the data set into disjointed subsets…

Data Structures and Algorithms · Computer Science 2011-05-26 Sylvain Corlay

Efficient and accurate low-rank approximations of multiple data sources are essential in the era of big data. The scaling of kernel-based learning algorithms to large datasets is limited by the O(n^2) computation and storage complexity of…

Machine Learning · Computer Science 2020-12-10 Martin Stražar , Tomaž Curk

We consider fast kernel summations in high dimensions: given a large set of points in $d$ dimensions (with $d \gg 3$) and a pair-potential function (the {\em kernel} function), we compute a weighted sum of all pairwise kernel interactions…

Machine Learning · Computer Science 2015-02-16 William B. March , George Biros

For some kernel matrices, low-rank approximations can be quickly obtained via analytic techniques. One important class of analytic methods that has received attention in recent years is based on the use of proxy points. Accuracy analysis…

Numerical Analysis · Mathematics 2026-05-26 Mikhail Lepilov , Jianlin Xia

Long polar codes can achieve the capacity of arbitrary binary-input discrete memoryless channels under a low complexity successive cancelation (SC) decoding algorithm. But for polar codes with short and moderate code length, the decoding…

Information Theory · Computer Science 2016-11-18 Jun Lin , Chenrong Xiong , Zhiyuan Yan

We propose a novel methodology for feature screening in clustering massive datasets, in which both the number of features and the number of observations can potentially be very large. Taking advantage of a fusion penalization based convex…

Methodology · Statistics 2017-10-05 Trambak Banerjee , Gourab Mukherjee , Peter Radchenko