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Related papers: Automated clinical coding using off-the-shelf larg…

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ICD Coding aims to assign a wide range of medical codes to a medical text document, which is a popular and challenging task in the healthcare domain. To alleviate the problems of long-tail distribution and the lack of annotations of…

Computation and Language · Computer Science 2025-05-27 Xu Zhang , Kun Zhang , Wenxin Ma , Rongsheng Wang , Chenxu Wu , Yingtai Li , S. Kevin Zhou

Clinical notes are text documents that are created by clinicians for each patient encounter. They are typically accompanied by medical codes, which describe the diagnosis and treatment. Annotating these codes is labor intensive and error…

Computation and Language · Computer Science 2018-04-18 James Mullenbach , Sarah Wiegreffe , Jon Duke , Jimeng Sun , Jacob Eisenstein

Data profiling is critical in machine learning for generating descriptive statistics, supporting both deeper understanding and downstream tasks like data valuation and curation. This work addresses profiling specifically in the context of…

Software Engineering · Computer Science 2025-03-21 Pankaj Thorat , Adnan Qidwai , Adrija Dhar , Aishwariya Chakraborty , Anand Eswaran , Hima Patel , Praveen Jayachandran

The implementation of Artificial Intelligence (AI) in the healthcare industry has garnered considerable attention, attributable to its prospective enhancement of clinical outcomes, expansion of access to superior healthcare, cost reduction,…

Computation and Language · Computer Science 2024-08-23 Arindam Sett , Somaye Hashemifar , Mrunal Yadav , Yogesh Pandit , Mohsen Hejrati

Pre-trained Large Language Models (LLMs) often struggle on out-of-domain datasets like healthcare focused text. We explore specialized pre-training to adapt smaller LLMs to different healthcare datasets. Three methods are assessed:…

Computation and Language · Computer Science 2024-04-01 Niall Taylor , Dan Schofield , Andrey Kormilitzin , Dan W Joyce , Alejo Nevado-Holgado

Cognitive Diagnosis (CD) has become a critical task in AI-empowered education, supporting personalized learning by accurately assessing students' cognitive states. However, traditional CD models often struggle in cold-start scenarios due to…

Computation and Language · Computer Science 2025-05-28 Yu He , Zihan Yao , Chentao Song , Tianyu Qi , Jun Liu , Ming Li , Qing Huang

With the emergence and rapid evolution of large language models (LLM), automating coding tasks has become an important research topic. Many efforts are underway and literature abounds about the efficacy of models and their ability to…

Software Engineering · Computer Science 2025-11-04 Anshu Dubey , Akash Dhruv

This paper aims to provide an approach for automatic coding of physician-patient communication transcripts to improve patient-centered communication (PCC). PCC is a central part of high-quality health care. To improve PCC, dialogues between…

Computation and Language · Computer Science 2021-09-23 Gilchan Park , Julia Taylor Rayz , Cleveland G. Shields

The text of clinical notes can be a valuable source of patient information and clinical assessments. Historically, the primary approach for exploiting clinical notes has been information extraction: linking spans of text to concepts in a…

Computation and Language · Computer Science 2019-06-11 Sarah Wiegreffe , Edward Choi , Sherry Yan , Jimeng Sun , Jacob Eisenstein

Large language models (LLMs) are effective at capturing complex, valuable conceptual representations from textual data for a wide range of real-world applications. However, in fields like Intelligent Fault Diagnosis (IFD), incorporating…

Artificial Intelligence · Computer Science 2024-12-03 Hamzah A. A. M. Qaid , Bo Zhang , Dan Li , See-Kiong Ng , Wei Li

Medical code assignment from clinical text is a fundamental task in clinical information system management. As medical notes are typically lengthy and the medical coding system's code space is large, this task is a long-standing challenge.…

Computation and Language · Computer Science 2022-03-16 Shaoxiong Ji , Shirui Pan , Pekka Marttinen

The recognition of medical entities from natural language is an ubiquitous problem in the medical field, with applications ranging from medical act coding to the analysis of electronic health data for public health. It is however a complex…

Computation and Language · Computer Science 2020-05-07 Louis Falissard , Claire Morgand , Sylvie Roussel , Claire Imbaud , Walid Ghosn , Karim Bounebache , Grégoire Rey

Large language models (LLMs) have shown impressive potential in helping with numerous medical challenges. Deploying LLMs in high-stakes applications such as medicine, however, brings in many concerns. One major area of concern relates to…

Computation and Language · Computer Science 2025-04-15 Hamed Fayyaz , Raphael Poulain , Rahmatollah Beheshti

Rare diseases affect millions worldwide but often face limited research focus due to their low prevalence. This results in prolonged diagnoses and a lack of approved therapies. Recent advancements in Large Language Models (LLMs) have shown…

Computation and Language · Computer Science 2024-10-28 Lang Cao , Jimeng Sun , Adam Cross

Accurate coding of tumor diagnoses with ICD-10-GM and ICD-O-3 is essential for structured cancer documentation in Germany. Smaller open-weight LLMs are appealing for privacy-preserving automation but often struggle with coding accuracy in…

Computation and Language · Computer Science 2025-10-16 Stefan Lenz , Lakisha Ortiz Rosario , Georg Vollmar , Arsenij Ustjanzew , Fatma Alickovic , Thomas Kindler , Torsten Panholzer

A long-running goal of the clinical NLP community is the extraction of important variables trapped in clinical notes. However, roadblocks have included dataset shift from the general domain and a lack of public clinical corpora and…

Computation and Language · Computer Science 2022-12-01 Monica Agrawal , Stefan Hegselmann , Hunter Lang , Yoon Kim , David Sontag

Large language models (LLMs) have demonstrated remarkable capabilities in code generation tasks. However, their effectiveness heavily relies on supervised training with extensive labeled (e.g., question-answering pairs) or unlabeled…

Computation and Language · Computer Science 2025-12-22 Jiajun Wu , Jian Yang , Wei Zhang , Lin Jing , Yuqing Ma , Ensheng Shi , Yuchi Ma , Zhoujun Li , Xianglong Liu

Dead code introduces several challenges in software development, such as increased binary size and maintenance difficulties. It can also obscure logical errors and be exploited for obfuscation in malware. For LLM-based code-related tasks,…

Software Engineering · Computer Science 2025-06-16 Minyu Chen , Guoqiang Li , Ling-I Wu , Ruibang Liu

Large language models (LLMs) have demonstrated significant potential in the realm of natural language understanding and programming code processing tasks. Their capacity to comprehend and generate human-like code has spurred research into…

Software Engineering · Computer Science 2024-03-07 Chongzhou Fang , Ning Miao , Shaurya Srivastav , Jialin Liu , Ruoyu Zhang , Ruijie Fang , Asmita , Ryan Tsang , Najmeh Nazari , Han Wang , Houman Homayoun

The accuracy and robustness of image classification with supervised deep learning are dependent on the availability of large-scale, annotated training data. However, there is a paucity of annotated data available due to the complexity of…

Computer Vision and Pattern Recognition · Computer Science 2019-03-27 Euijoon Ahn , Ashnil Kumar , Dagan Feng , Michael Fulham , Jinman Kim