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Class imbalance is an inherent problem in many machine learning classification tasks. This often leads to trained models that are unusable for any practical purpose. In this study we explore an unsupervised approach to address these…

Machine Learning · Computer Science 2021-08-20 Ademola Okerinde , Lior Shamir , William Hsu , Tom Theis , Nasik Nafi

Graph Attention Networks (GATs) are designed to provide flexible neighborhood aggregation that assigns weights to neighbors according to their importance. In practice, however, GATs are often unable to switch off task-irrelevant…

Machine Learning · Computer Science 2024-07-31 Nimrah Mustafa , Rebekka Burkholz

The rapid growth of Internet services and mobile devices provides an excellent opportunity to satisfy the strong demand for the personalized item or product recommendation. However, with the tremendous increase of users and items,…

Information Retrieval · Computer Science 2018-12-10 Chen Ma , Peng Kang , Bin Wu , Qinglong Wang , Xue Liu

Discrete diffusion models (DMs) have achieved strong performance in language and other discrete domains, offering a compelling alternative to autoregressive modeling. Yet this performance typically depends on large training datasets,…

Machine Learning · Computer Science 2026-04-16 Julian Kleutgens , Claudio Battiloro , Lingkai Kong , Benjamin Grewe , Francesca Dominici , Mauricio Tec

Recent works reveal that network embedding techniques enable many machine learning models to handle diverse downstream tasks on graph structured data. However, as previous methods usually focus on learning embeddings for a single network,…

Machine Learning · Computer Science 2019-08-21 Yizhou Zhang , Guojie Song , Lun Du , Shuwen Yang , Yilun Jin

Transfer learning under domain shift remains a fundamental challenge due to the divergence between source and target data manifolds. In this paper, we propose MAADA (Manifold-Aware Adversarial Data Augmentation), a novel framework that…

Computer Vision and Pattern Recognition · Computer Science 2025-12-05 Hana Satou , Alan Mitkiy , Emma Collins , Finn Kingston

There has been a recent surge in transformer-based architectures for learning on graphs, mainly motivated by attention as an effective learning mechanism and the desire to supersede handcrafted operators characteristic of message passing…

Machine Learning · Computer Science 2025-06-10 David Buterez , Jon Paul Janet , Dino Oglic , Pietro Lio

Transformers have achieved remarkable success across domains, motivating the rise of Graph Transformers (GTs) as attention-based architectures for graph-structured data. A key design choice in GTs is the use of Graph Neural Network…

Machine Learning · Computer Science 2026-05-29 Javier Porras-Valenzuela , Zhiyang Wang , Xiaotao Shang , Yusu Wang , Alejandro Ribeiro

Single-cell spatial transcriptomics (ST) offers a unique approach to measuring gene expression profiles and spatial cell locations simultaneously. However, most existing ST methods assume that cells in closer spatial proximity exhibit more…

Genomics · Quantitative Biology 2025-06-10 Xiongtao Xiao , Xiaofeng Chen , Feiyan Jiang , Songming Zhang , Wenming Cao , Cheng Tan , Zhangyang Gao , Zhongshan Li

Representation learning on text-attributed graphs (TAGs) integrates structural connectivity with rich textual semantics, enabling applications in diverse domains. Current methods largely rely on contrastive learning to maximize cross-modal…

Graphics · Computer Science 2025-10-15 Heng Zhang , Tianyi Zhang , Yuling Shi , Xiaodong Gu , Yaomin Shen , Zijian Zhang , Yilei Yuan , Hao Zhang , Jin Huang

Graphon models provide a flexible nonparametric framework for estimating latent connectivity probabilities in networks, enabling a range of downstream applications such as link prediction and data augmentation. However, accurate graphon…

Machine Learning · Computer Science 2025-10-28 Yuyao Wang , Yu-Hung Cheng , Debarghya Mukherjee , Huimin Cheng

Recently, transformers have shown promising performance in learning graph representations. However, there are still some challenges when applying transformers to real-world scenarios due to the fact that deep transformers are hard to train…

Machine Learning · Computer Science 2022-05-13 Sixiao Zhang , Hongxu Chen , Haoran Yang , Xiangguo Sun , Philip S. Yu , Guandong Xu

Self-supervised learning is attracting large attention in point cloud understanding. However, exploring discriminative and transferable features still remains challenging due to their nature of irregularity and sparsity. We propose a…

Computer Vision and Pattern Recognition · Computer Science 2023-03-24 Yun Liu , Xuefeng Yan , Zhilei Chen , Zhiqi Li , Zeyong Wei , Mingqiang Wei

The problem of long-tailed recognition, where the number of examples per class is highly unbalanced, is considered. It is hypothesized that the well known tendency of standard classifier training to overfit to popular classes can be…

Computer Vision and Pattern Recognition · Computer Science 2021-05-04 Bo Liu , Haoxiang Li , Hao Kang , Gang Hua , Nuno Vasconcelos

Link prediction in heterogeneous networks is crucial for understanding the intricacies of network structures and forecasting their future developments. Traditional methodologies often face significant obstacles, including…

Computational Engineering, Finance, and Science · Computer Science 2025-01-07 Shengming Zhang , Le Zhang , Jingbo Zhou , Hui Xiong

Constructing appropriate representations of molecules lies at the core of numerous tasks such as material science, chemistry and drug designs. Recent researches abstract molecules as attributed graphs and employ graph neural networks (GNN)…

Machine Learning · Computer Science 2021-07-29 Jianwen Chen , Shuangjia Zheng , Ying Song , Jiahua Rao , Yuedong Yang

Gating mechanisms have emerged as an effective strategy integrated into model designs beyond recurrent neural networks for addressing long-range dependency problems. In a broad understanding, it provides adaptive control over the…

Computer Vision and Pattern Recognition · Computer Science 2026-02-27 Yifan Wang , Xu Ma , Yitian Zhang , Zhongruo Wang , Sung-Cheol Kim , Vahid Mirjalili , Vidya Renganathan , Yun Fu

Shape assembly, which aims to reassemble separate parts into a complete object, has gained significant interest in recent years. Existing methods primarily rely on networks to predict the poses of individual parts, but often fail to…

Computer Vision and Pattern Recognition · Computer Science 2024-12-03 Jiahan Li , Chaoran Cheng , Jianzhu Ma , Ge Liu

Multi-domain graph pre-training integrates knowledge from diverse domains to enhance performance in the target domains, which is crucial for building graph foundation models. Despite initial success, existing solutions often fall short of…

Machine Learning · Computer Science 2026-03-03 Li Sun , Zhenhao Huang , Silei Chen , Lanxu Yang , Junda Ye , Sen Su , Philip S. Yu

In recent years, molecular representation learning has emerged as a key area of focus in various chemical tasks. However, many existing models fail to fully consider the geometric information of molecular structures, resulting in less…

Machine Learning · Computer Science 2023-06-29 Bumju Kwak , Jiwon Park , Taewon Kang , Jeonghee Jo , Byunghan Lee , Sungroh Yoon