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Magnetic Resonance Fingerprinting (MRF) enables fast quantitative imaging, yet reconstructing high-resolution 3D data remains computationally demanding. Non-Cartesian reconstructions require repeated non-uniform FFTs, and the commonly used…

Image and Video Processing · Electrical Eng. & Systems 2026-02-13 Yonatan Urman , Mark Nishimura , Daniel Abraham , Xiaozhi Cao , Kawin Setsompop

Magnetic Resonance Fingerprinting (MRF) has emerged as a promising quantitative MR imaging approach. Deep learning methods have been proposed for MRF and demonstrated improved performance over classical compressed sensing algorithms.…

Image and Video Processing · Electrical Eng. & Systems 2022-01-27 Dongdong Chen , Mike E. Davies , Mohammad Golbabaee

We adopt data structure in the form of cover trees and iteratively apply approximate nearest neighbour (ANN) searches for fast compressed sensing reconstruction of signals living on discrete smooth manifolds. Levering on the recent…

Machine Learning · Statistics 2018-09-13 Mohammad Golbabaee , Zhouye Chen , Yves Wiaux , Mike E. Davies

We explore the application of concepts developed in High Energy Physics (HEP) for advanced medical data analysis. Our study case is a problem with high social impact: clinically-feasible Magnetic Resonance Fingerprinting (MRF). MRF is a…

3D biometric techniques on finger traits have become a new trend and have demonstrated a powerful ability for recognition and anti-counterfeiting. Existing methods follow an explicit 3D pipeline that reconstructs the models first and then…

Computer Vision and Pattern Recognition · Computer Science 2024-10-15 Hongbin Xu , Junduan Huang , Yuer Ma , Zifeng Li , Wenxiong Kang

Magnetic Resonance Fingerprinting (MRF) and other highly accelerated transient-state parameter mapping techniques enable simultaneous quantification of multiple tissue properties, but often suffer from aliasing artifacts due to compressed…

Magnetic Resonance Fingerprinting (MRF) methods typically rely on dictionary matching to map the temporal MRF signals to quantitative tissue parameters. These methods suffer from heavy storage and computation requirements as the dictionary…

Image and Video Processing · Electrical Eng. & Systems 2019-11-25 Dongdong Chen , Mohammad Golbabaee , Pedro A. Gomez , Marion I. Menzel , Mike E. Davies

Deep learning (DL) has recently emerged to address the heavy storage and computation requirements of the baseline dictionary-matching (DM) for Magnetic Resonance Fingerprinting (MRF) reconstruction. Fed with non-iterated back-projected…

Computer Vision and Pattern Recognition · Computer Science 2019-02-28 Mohammad Golbabaee , Carolin M. Pirkl , Marion I. Menzel , Guido Buonincontri , Pedro A. Gómez

Magnetic Resonance Fingerprinting (MRF) is a time-efficient approach to quantitative MRI, enabling the mapping of multiple tissue properties from a single, accelerated scan. However, achieving accurate reconstructions remains challenging,…

Image and Video Processing · Electrical Eng. & Systems 2024-12-19 Perla Mayo , Carolin M. Pirkl , Alin Achim , Bjoern H. Menze , Mohammad Golbabaee

Magnetic resonance fingerprinting (MRF) can successfully recover quantitative multi-parametric maps of human tissue in a very short acquisition time. Due to their pseudo-random nature, the large spatial undersampling artifacts can be…

Over the past decade, several studies have explored the potential of magnetic resonance fingerprinting (MRF) for the quantification of brain hemodynamics, oxygenation, and perfusion. Recent advances in simulation models and reconstruction…

Signal Processing · Electrical Eng. & Systems 2025-12-16 T. Coudert , A. Delphin , A. Barrier , E L Barbier , B. Lemasson , J M Warnking , T. Christen

In MR fingerprinting (MRF) reconstruction, measured data is pattern-matched to simulated signals to extract quantitative tissue parameters. A critical drawback to this approach is the exponentially increasing compute time for mapping of…

Medical Physics · Physics 2024-07-17 Victoria Y. Yu , Kathryn R. Tringale , Ricardo Otazo , Ouri Cohen

Radio-frequency fingerprints~(RFFs) are promising solutions for realizing low-cost physical layer authentication. Machine learning-based methods have been proposed for RFF extraction and discrimination. However, most existing methods are…

Machine Learning · Computer Science 2021-08-11 Renjie Xie , Wei Xu , Yanzhi Chen , Jiabao Yu , Aiqun Hu , Derrick Wing Kwan Ng , A. Lee Swindlehurst

We propose a novel numerical approach to separate multiple tissue compartments in image voxels and to estimate quantitatively their nuclear magnetic resonance (NMR) properties and mixture fractions, given magnetic resonance fingerprinting…

Computer Vision and Pattern Recognition · Computer Science 2020-11-24 Mohammad Golbabaee , Clarice Poon

Neural implicit surface reconstruction with signed distance function has made significant progress, but recovering fine details such as thin structures and complex geometries remains challenging due to unreliable or noisy geometric priors.…

Computer Vision and Pattern Recognition · Computer Science 2026-03-02 Qiyu Feng , Jiwei Shan , Shing Shin Cheng , Hesheng Wang

Magnetic Resonance Fingerprinting (MRF) is a novel technique that simultaneously estimates multiple tissue-related parameters, such as the longitudinal relaxation time T1, the transverse relaxation time T2, off resonance frequency B0 and…

Image and Video Processing · Electrical Eng. & Systems 2022-09-20 Zhe Wang , Hongsheng Li , Qinwei Zhang , Jing Yuan , Xiaogang Wang

Consistency of the predictions with respect to the physical forward model is pivotal for reliably solving inverse problems. This consistency is mostly un-controlled in the current end-to-end deep learning methodologies proposed for the…

Image and Video Processing · Electrical Eng. & Systems 2020-07-07 Dongdong Chen , Mike E. Davies , Mohammad Golbabaee

MR Fingerprinting is a novel quantitative MR technique that could simultaneously provide multiple tissue property maps. When optimizing MRF scans, modeling undersampling errors and field imperfections in cost functions will make the…

Image and Video Processing · Electrical Eng. & Systems 2021-05-26 Siyuan Hu , Stephen Jordan , Rasim Boyacioglu , Ignacio Rozada , Matthias Troyer , Mark Griswold , Debra McGivney , Dan Ma

Magnetic Resonance Imaging (MRI) is widely used in clinical practice, but suffered from prolonged acquisition time. Although deep learning methods have been proposed to accelerate acquisition and demonstrate promising performance, they rely…

Image and Video Processing · Electrical Eng. & Systems 2025-12-30 Hao Zhang , Qi Wang , Jian Sun , Zhijie Wen , Jun Shi , Shihui Ying

Recent advances in the masked autoencoder (MAE) paradigm have significantly propelled self-supervised skeleton-based action recognition. However, most existing approaches limit reconstruction targets to raw joint coordinates or their simple…

Computer Vision and Pattern Recognition · Computer Science 2025-09-05 Shengkai Sun , Zefan Zhang , Jianfeng Dong , Zhiyong Cheng , Xiaojun Chang , Meng Wang