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We develop a framework for analyzing multivariate time series using topological data analysis (TDA) methods. The proposed methodology involves converting the multivariate time series to point cloud data, calculating Wasserstein distances…

Algebraic Topology · Mathematics 2020-12-29 Chengyuan Wu , Carol Anne Hargreaves

The stability of persistence diagrams is among the most important results in applied and computational topology. Most results in the literature phrase stability in terms of the bottleneck distance between diagrams and the $\infty$-norm of…

Algebraic Topology · Mathematics 2025-07-11 Primoz Skraba , Katharine Turner

Large time-varying graphs are increasingly common in financial, social and biological settings. Feature extraction that efficiently encodes the complex structure of sparse, multi-layered, dynamic graphs presents computational and…

Machine Learning · Computer Science 2023-05-12 Umar Islambekov , Hasani Pathirana , Omid Khormali , Cuneyt Akcora , Ekaterina Smirnova

Topological data analysis leverages topological features to analyze datasets, with applications in diverse fields like medical sciences and biology. A key tool of this theory is the persistence diagram, which encodes topological information…

Algebraic Topology · Mathematics 2024-10-22 Michael Etienne Van Huffel , Olympio Hacquard , Vadim Lebovici , Matteo Palo

One of the fundamental challenges associated with reinforcement learning (RL) is that collecting sufficient data can be both time-consuming and expensive. In this paper, we formalize a concept of time reversal symmetry in a Markov decision…

Machine Learning · Computer Science 2023-11-29 Brett Barkley , Amy Zhang , David Fridovich-Keil

Topological data analysis (TDA), while abstract, allows a characterization of time-series data obtained from nonlinear and complex dynamical systems. Though it is surprising that such an abstract measure of structure - counting pieces and…

Computational Geometry · Computer Science 2020-01-07 Nicole Sanderson , Elliott Shugerman , Samantha Molnar , James D. Meiss , Elizabeth Bradley

The study of topology is strictly speaking, a topic in pure mathematics. However in only a few years, Topological Data Analysis (TDA), which refers to methods of utilizing topological features in data (such as connected components, tunnels,…

Applications · Statistics 2019-09-25 Nalini Ravishanker , Renjie Chen

This application paper presents a comprehensive experimental evaluation of the suitability of Topological Data Analysis (TDA) for the quantitative comparison of turbulent flows. Specifically, our study documents the usage of the persistence…

Despite the remarkable accuracies attained by machine learning classifiers to separate complex datasets in a supervised fashion, most of their operation falls short to provide an informed intuition about the structure of data, and, what is…

Machine Learning · Computer Science 2023-03-09 Aina Ferrà , Gloria Cecchini , Fritz-Pere Nobbe Fisas , Carles Casacuberta , Ignasi Cos

We introduce a method of time series analysis for two-dimensional transient flow patterns based on Topological Flow Data Analysis (TFDA), a new approach to topological data analysis. TFDA identifies local topological flow structures from an…

Fluid Dynamics · Physics 2026-04-14 Takashi Sakajo , Takeshi Matsumoto , Shizuo Kaji , Tomoo Yokoyama , Tomoki Uda

One of the most important problems arising in time series analysis is that of bifurcation, or change point detection. That is, given a collection of time series over a varying parameter, when has the structure of the underlying dynamical…

Machine Learning · Statistics 2023-03-15 Audun Myers , Firas A. Khasawneh , Elizabeth Munch

Topological data analysis (TDA) uses persistent homology to quantify loops and higher-dimensional holes in data, making it particularly relevant for examining the characteristics of images of cells in the field of cell biology. In the…

Methodology · Statistics 2024-05-06 Susan Glenn , Jessi Cisewski-Kehe , Jun Zhu , William M. Bement

In this work, we present a generalization of extended persistent homology to filtrations of graded sub-groups by defining relative homology in this setting. Our work provides a more comprehensive and flexible approach to get an algebraic…

Algebraic Topology · Mathematics 2023-11-01 Fang Sun , Shengwen Xie , Xuezhi Zhao

Topological Data Analysis (TDA) is a discipline that applies algebraic topology techniques to analyze complex, multi-dimensional data. Although it is a relatively new field, TDA has been widely and successfully applied across various…

Machine Learning · Computer Science 2024-07-29 Martin Uray , Barbara Giunti , Michael Kerber , Stefan Huber

Topological Data Analysis (TDA) has emerged as a powerful framework for extracting robust, multiscale, and interpretable features from complex molecular data for artificial intelligence (AI) modeling and topological deep learning (TDL).…

Biomolecules · Quantitative Biology 2025-09-23 JunJie Wee , Jian Jiang

Visualization in the emerging field of topological data analysis has progressed from persistence barcodes and persistence diagrams to display of two-parameter persistent homology. Although persistence barcodes and diagrams have permitted…

Applications · Statistics 2019-01-08 Raoul R. Wadhwa , Andrew Dhawan , Drew F. K. Williamson , Jacob G. Scott

Topological data analysis is an emerging area in exploratory data analysis and data mining. Its main tool, persistent homology, has become a popular technique to study the structure of complex, high-dimensional data. In this paper, we…

Graphics · Computer Science 2017-10-04 Mustafa Hajij , Bei Wang , Carlos Scheidegger , Paul Rosen

Persistent homology is a topological data analysis tool that has been widely generalized, extending its scope beyond the field of topology. Among its extensions, steady and ranging persistence were developed to study a wide variety of graph…

Algebraic Topology · Mathematics 2026-05-15 Yann-Situ Gazull

Persistent homology barcodes and diagrams are a cornerstone of topological data analysis that capture the "shape" of a wide range of complex data structures, such as point clouds, networks, and functions. However, their use in statistical…

Algebraic Topology · Mathematics 2024-09-24 Qiquan Wang , Inés García-Redondo , Pierre Faugère , Gregory Henselman-Petrusek , Anthea Monod

We explore a novel application of zero-dimensional persistent homology from Topological Data Analysis (TDA) for bracketing zero-crossings of both one-dimensional continuous functions, and uniformly sampled time series. We present an…

Computational Geometry · Computer Science 2024-03-15 Sunia Tanweer , Firas A. Khasawneh , Elizabeth Munch
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