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Stability arguments are often used to prevent learning algorithms from having ever increasing activity and weights that hinder generalization. However, stability conditions can clash with the sparsity required to augment the energy…

Neural and Evolutionary Computing · Computer Science 2024-01-08 Luca Herranz-Celotti , Jean Rouat

We study the problem of learning features through self-supervision that are generalisable to multiple graphs. State-of-the-art graph self-supervision restricts training to only one graph, resulting in graph-specific models that are…

Machine Learning · Computer Science 2024-07-31 Laya Das , Sai Munikoti , Nrushad Joshi , Mahantesh Halappanavar

Recovering sparse conditional independence graphs from data is a fundamental problem in machine learning with wide applications. A popular formulation of the problem is an $\ell_1$ regularized maximum likelihood estimation. Many convex…

Machine Learning · Computer Science 2019-12-24 Harsh Shrivastava , Xinshi Chen , Binghong Chen , Guanghui Lan , Srinvas Aluru , Han Liu , Le Song

Inferring synaptic connectivity from neural population activity is a fundamental challenge in computational neuroscience, complicated by partial observability and mismatches between inference models and true circuit dynamics. In this study,…

Neurons and Cognition · Quantitative Biology 2025-10-28 Kijung Yoon

Learning a graph topology to reveal the underlying relationship between data entities plays an important role in various machine learning and data analysis tasks. Under the assumption that structured data vary smoothly over a graph, the…

Machine Learning · Statistics 2023-08-23 Xingyue Pu , Tianyue Cao , Xiaoyun Zhang , Xiaowen Dong , Siheng Chen

With the wide-spread availability of complex relational data, semi-supervised node classification in graphs has become a central machine learning problem. Graph neural networks are a recent class of easy-to-train and accurate methods for…

Machine Learning · Computer Science 2021-06-08 Junteng Jia , Cenk Baykal , Vamsi K. Potluru , Austin R. Benson

Graph Neural Networks (GNNs) that are based on the message passing (MP) paradigm generally exchange information between 1-hop neighbors to build node representations at each layer. In principle, such networks are not able to capture…

Machine Learning · Computer Science 2023-11-29 Vijay Prakash Dwivedi , Ladislav Rampášek , Mikhail Galkin , Ali Parviz , Guy Wolf , Anh Tuan Luu , Dominique Beaini

Graph Neural Networks (GNNs) have achieved promising results for semi-supervised learning tasks on graphs such as node classification. Despite the great success of GNNs, many real-world graphs are often sparsely and noisily labeled, which…

Machine Learning · Computer Science 2021-06-10 Enyan Dai , Charu Aggarwal , Suhang Wang

Graph Neural Networks (GNNs) have exhibited impressive performance in many graph learning tasks. Nevertheless, the performance of GNNs can deteriorate when the input graph data suffer from weak information, i.e., incomplete structure,…

Machine Learning · Computer Science 2023-05-31 Yixin Liu , Kaize Ding , Jianling Wang , Vincent Lee , Huan Liu , Shirui Pan

Graph classification is a widely studied problem and has broad applications. In many real-world problems, the number of labeled graphs available for training classification models is limited, which renders these models prone to overfitting.…

Machine Learning · Computer Science 2020-09-15 Jiaqi Zeng , Pengtao Xie

Practically, we are often in the dilemma that the labeled data at hand are inadequate to train a reliable classifier, and more seriously, some of these labeled data may be mistakenly labeled due to the various human factors. Therefore, this…

Machine Learning · Computer Science 2019-02-21 Chen Gong , Hengmin Zhang , Jian Yang , Dacheng Tao

Graph neural networks (GNNs) have emerged as a powerful tool for graph classification and representation learning. However, GNNs tend to suffer from over-smoothing problems and are vulnerable to graph perturbations. To address these…

Machine Learning · Computer Science 2021-11-01 Yuzhou Chen , Baris Coskunuzer , Yulia R. Gel

Graph-based retrieval-augmented generation (RAG) enables large language models (LLMs) to ground responses with structured external knowledge from up-to-date knowledge graphs (KGs) and reduce hallucinations. However, LLMs often rely on a…

Computation and Language · Computer Science 2025-07-01 Deyu Zou , Yongqiang Chen , Mufei Li , Siqi Miao , Chenxi Liu , Bo Han , James Cheng , Pan Li

The success of Graph Neural Networks (GNN) in learning on non-Euclidean data arouses many subtopics, such as Label-inputted GNN (LGNN) and Implicit GNN (IGNN). LGNN, explicitly inputting supervising information (a.k.a. labels) in GNN,…

Machine Learning · Computer Science 2023-06-01 Yi Luo , Guiduo Duan , Guangchun Luo , Aiguo Chen

Node Importance Estimation (NIE) is a task of inferring importance scores of the nodes in a graph. Due to the availability of richer data and knowledge, recent research interests of NIE have been dedicating to knowledge graphs for…

Artificial Intelligence · Computer Science 2024-02-29 Tianyu Zhang , Chengbin Hou , Rui Jiang , Xuegong Zhang , Chenghu Zhou , Ke Tang , Hairong Lv

Scholarly web is a vast network of knowledge connected by citations. However, this system is increasingly compromised by miscitation, where references do not support or even contradict the claims they are cited for. Current miscitation…

Information Retrieval · Computer Science 2026-03-16 Huidong Wu , Haojia Xiang , Jingtong Gao , Xiangyu Zhao , Dengsheng Wu , Jianping Li

A scalable semi-supervised node classification method on graph-structured data, called GraphHop, is proposed in this work. The graph contains attributes of all nodes but labels of a few nodes. The classical label propagation (LP) method and…

Machine Learning · Computer Science 2021-01-08 Tian Xie , Bin Wang , C. -C. Jay Kuo

One of the key problems of GNNs is how to describe the importance of neighbor nodes in the aggregation process for learning node representations. A class of GNNs solves this problem by learning implicit weights to represent the importance…

Machine Learning · Computer Science 2021-03-03 Haifeng Li , Jun Cao , Jiawei Zhu , Qing Zhu , Guohua Wu

Graphs are a fundamental abstraction for modeling relational data. However, graphs are discrete and combinatorial in nature, and learning representations suitable for machine learning tasks poses statistical and computational challenges. In…

Machine Learning · Statistics 2019-05-16 Aditya Grover , Aaron Zweig , Stefano Ermon

Recent advances in generic large models, such as GPT and DeepSeek, have motivated the introduction of universality to graph pre-training, aiming to learn rich and generalizable knowledge across diverse domains using graph representations to…

Machine Learning · Computer Science 2026-02-27 Lianze Shan , Jitao Zhao , Dongxiao He , Siqi Liu , Jiaxu Cui , Weixiong Zhang