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Related papers: SALSA: Semantically-Aware Latent Space Autoencoder

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Variational autoencoders learn unsupervised data representations, but these models frequently converge to minima that fail to preserve meaningful semantic information. For example, variational autoencoders with autoregressive decoders often…

Machine Learning · Computer Science 2019-05-21 Bryan Seybold , Emily Fertig , Alex Alemi , Ian Fischer

Sparse autoencoders (SAEs) have recently emerged as a powerful tool for interpreting the internal representations of large language models (LLMs), revealing latent latent features with semantical meaning. This interpretability has also…

Other Quantitative Biology · Quantitative Biology 2025-07-11 Haoxiang Guan , Jiyan He , Jie Zhang

In various natural language processing (NLP) tasks, fine-tuning Pre-trained Language Models (PLMs) often leads to the issue of spurious correlations, which negatively impacts performance, particularly when dealing with out-of-distribution…

Computation and Language · Computer Science 2025-04-17 Suyoung Bae , Hyojun Kim , YunSeok Choi , Jee-Hyong Lee

Recent advances in generic large models, such as GPT and DeepSeek, have motivated the introduction of universality to graph pre-training, aiming to learn rich and generalizable knowledge across diverse domains using graph representations to…

Machine Learning · Computer Science 2026-02-27 Lianze Shan , Jitao Zhao , Dongxiao He , Siqi Liu , Jiaxu Cui , Weixiong Zhang

The autoencoder is an artificial neural network model that learns hidden representations of unlabeled data. With a linear transfer function it is similar to the principal component analysis (PCA). While both methods use weight vectors for…

Computer Vision and Pattern Recognition · Computer Science 2019-02-04 Ya Ju Fan

Representing molecular structures effectively in chemistry remains a challenging task. Language models and graph-based models are extensively utilized within this domain, consistently achieving state-of-the-art results across an array of…

Machine Learning · Computer Science 2025-05-27 Nikolai Rekut , Alexey Orlov , Klea Ziu , Elizaveta Starykh , Martin Takac , Aleksandr Beznosikov

Automated computational analysis of the vast chemical space is critical for numerous fields of research such as drug discovery and material science. Representation learning techniques have recently been employed with the primary objective…

Quantitative Methods · Quantitative Biology 2023-05-26 Atakan Yüksel , Erva Ulusoy , Atabey Ünlü , Tunca Doğan

Existing zero-shot learning (ZSL) methods usually learn a projection function between a feature space and a semantic embedding space(text or attribute space) in the training seen classes or testing unseen classes. However, the projection…

Computer Vision and Pattern Recognition · Computer Science 2018-01-26 Guangfeng Lin , Caixia Fan , Wanjun Chen , Yajun Chen , Fan Zhao

Autoencoders (AE) are simple yet powerful class of neural networks that compress data by projecting input into low-dimensional latent space (LS). Whereas LS is formed according to the loss function minimization during training, its…

Computer Vision and Pattern Recognition · Computer Science 2025-08-28 Nikita Gabdullin

Unsupervised approaches to large language model (LLM) interpretability, such as sparse autoencoders (SAEs), offer a way to decode LLM activations into interpretable and, ideally, controllable concepts. On the one hand, these approaches…

Machine Learning · Computer Science 2026-03-03 Shruti Joshi , Andrea Dittadi , Sébastien Lachapelle , Dhanya Sridhar

Exhaustive virtual screening is highly informative but often intractable against the expensive objective functions involved in modern drug discovery. This problem is exacerbated in combinatorial contexts such as multi-vector expansion,…

Machine Learning · Computer Science 2025-05-20 Tom George Grigg , Mason Burlage , Oliver Brook Scott , Adam Taouil , Dominique Sydow , Liam Wilbraham

Analyzing large-scale text corpora is a core challenge in machine learning, crucial for tasks like identifying undesirable model behaviors or biases in training data. Current methods often rely on costly LLM-based techniques (e.g.…

Artificial Intelligence · Computer Science 2025-12-12 Nick Jiang , Xiaoqing Sun , Lisa Dunlap , Lewis Smith , Neel Nanda

Deep neural networks achieve impressive performance but remain difficult to interpret and control. We present SALVE (Sparse Autoencoder-Latent Vector Editing), a unified "discover, validate, and control" framework that bridges mechanistic…

Machine Learning · Computer Science 2026-03-10 Vegard Flovik

Descriptor generation methods using latent representations of encoder$-$decoder (ED) models with SMILES as input are useful because of the continuity of descriptor and restorability to the structure. However, it is not clear how the…

Chemical Physics · Physics 2023-04-14 Shumpei Nemoto , Tadahaya Mizuno , Hiroyuki Kusuhara

Self-supervised learning (SSL) has been extensively explored in recent years. Particularly, generative SSL has seen emerging success in natural language processing and other AI fields, such as the wide adoption of BERT and GPT. Despite…

Machine Learning · Computer Science 2022-07-14 Zhenyu Hou , Xiao Liu , Yukuo Cen , Yuxiao Dong , Hongxia Yang , Chunjie Wang , Jie Tang

This paper will explore the use of autoencoders for semantic hashing in the context of Information Retrieval. This paper will summarize how to efficiently train an autoencoder in order to create meaningful and low-dimensional encodings of…

Information Retrieval · Computer Science 2018-03-14 Sean Billings

End-to-end Automatic Speech Recognition (ASR) models are usually trained to optimize the loss of the whole token sequence, while neglecting explicit phonemic-granularity supervision. This could result in recognition errors due to…

Audio and Speech Processing · Electrical Eng. & Systems 2022-06-22 Li Fu , Xiaoxiao Li , Runyu Wang , Lu Fan , Zhengchen Zhang , Meng Chen , Youzheng Wu , Xiaodong He

Causal structure learning has been a challenging task in the past decades and several mainstream approaches such as constraint- and score-based methods have been studied with theoretical guarantees. Recently, a new approach has transformed…

Machine Learning · Computer Science 2019-11-19 Ignavier Ng , Shengyu Zhu , Zhitang Chen , Zhuangyan Fang

In computational pathology, deep learning (DL) models for tasks such as segmentation or tissue classification are known to suffer from domain shifts due to different staining techniques. Stain adaptation aims to reduce the generalization…

Image and Video Processing · Electrical Eng. & Systems 2024-07-04 Daniel Reisenbüchler , Lucas Luttner , Nadine S. Schaadt , Friedrich Feuerhake , Dorit Merhof

Stack autoencoder (SAE), as a representative deep network, has unique and excellent performance in feature learning, and has received extensive attention from researchers. However, existing deep SAEs focus on original samples without…

Machine Learning · Computer Science 2022-10-28 Chuanyan Zhou , Jie Ma , Fan Li , Yongming Li , Pin Wang , Xiaoheng Zhang