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The fast transmission rate of COVID-19 worldwide has made this virus the most important challenge of year 2020. Many mitigation policies have been imposed by the governments at different regional levels (country, state, county, and city) to…

Applications · Statistics 2022-05-04 Yue Bai , Abolfazl Safikhani , George Michailidis

Background: Outcome measures that are count variables with excessive zeros are common in health behaviors research. There is a lack of empirical data about the relative performance of prevailing statistical models when outcomes are…

Applications · Statistics 2023-08-17 Zhengyang Zhou , Dateng Li , David Huh , Minge Xie , Eun-Young Mun

We present CRISP (COVID-19 Risk Score Prediction), a probabilistic graphical model for COVID-19 infection spread through a population based on the SEIR model where we assume access to (1) mutual contacts between pairs of individuals across…

Social and Information Networks · Computer Science 2022-07-04 Ralf Herbrich , Rajeev Rastogi , Roland Vollgraf

Many clinical endpoint measures, such as the number of standard drinks consumed per week or the number of days that patients stayed in the hospital, are count data with excessive zeros. However, the zero-inflated nature of such outcomes is…

Applications · Statistics 2022-07-14 Zhengyang Zhou , Minge Xie , David Huh , Eun-Young Mun

To analyze longitudinal zero-inflated count data, we extend existing models by introducing marginalized zero-inflated Poisson (MZIP) models with random effects, which explicitly capture the marginal effect of covariates and address…

Methodology · Statistics 2025-12-01 Keunbaik Lee , Eun Jin Jang , Dipak Dey

Facing a global epidemic of new infectious diseases such as COVID-19, non-pharmaceutical interventions (NPIs), which reduce transmission rates without medical actions, are being implemented around the world to mitigate spreads. One of the…

Populations and Evolution · Quantitative Biology 2021-03-04 Naoya Fujiwara , Tomokatsu Onaga , Takayuki Wada , Shouhei Takeuchi , Junji Seto , Tomoki Nakaya , Kazuyuki Aihara

The COVID-19 pandemic (SARS-CoV-2 virus) is the defying global health crisis of our time. The absence of mass testing and the relevant presence of asymptomatic individuals causes the available data of the COVID-19 pandemic in Brazil to be…

Populations and Evolution · Quantitative Biology 2020-06-30 Saulo B. Bastos , Marcelo M. Morato , Daniel O. Cajueiro anda Julio E Normey-Rico

The outbreak of Covid-19 led the world to an unprecedent health and economical crisis. In an attempt to responde to this emergency researchers worldwide are intensively studying the Covid-19 pandemic dynamics. In this work, a SIRSi…

Populations and Evolution · Quantitative Biology 2020-08-07 Cristiane M. Batistela , Diego P. F. Correa , Átila M Bueno , José R. C. Piqueira

The coronavirus pandemic has rapidly evolved into an unprecedented crisis. The susceptible-infectious-removed (SIR) model and its variants have been used for modeling the pandemic. However, time-independent parameters in the classical…

Populations and Evolution · Quantitative Biology 2020-09-09 Hyokyoung G. Hong , Yi Li

The Poisson distribution is often used as a standard model for count data. Quite often, however, such data sets are not well fit by a Poisson model because they have more zeros than are compatible with this model. For these situations, a…

Statistics Theory · Mathematics 2008-12-18 M. J. Bayarri , James O. Berger , Gauri S. Datta

The problem of estimating the ratio of the means of a two-component Poisson mixture model is considered, when each component is subject to zero-inflation, i.e., excess zero counts. The. resulting {\it zero-inflated Poisson mixture (ZIPM)…

Statistics Theory · Mathematics 2022-03-31 Michael D. Perlman

This paper presents a mathematical model to investigate co-infection with HIV/AIDS and zika virus (ZIKV) in Colombia and Brazil, where the first cases were reported in 2015-2016. The model considers the sexual transmission dynamics of both…

Populations and Evolution · Quantitative Biology 2024-04-17 Jhoana P. Romero-Leiton , Idriss Sekkak , Julien Arino , Bouchra Nasri

In this study, we develop and analyze a nested multi-scale model for COVID -19 disease that integrates within-host scale and between-host scale sub-models. First, the well-posedness of the multi-scale model is discussed, followed by the…

Dynamical Systems · Mathematics 2021-08-30 Bishal Chhetri , D. K. K Vamsi , Carani Sanjeevi

Non-pharmaceutical interventions (NPIs) such as quarantine, self-isolation, social distancing, and virus-contact tracing can greatly reduce the spread of the virus during a pandemic. In the wave of the COVID-19 pandemic, many countries have…

Physics and Society · Physics 2020-12-16 Jingjing He , Xuefei Guan , Xiaochang Duan , Tian Shen , Jing Lin

We propose a comprehensive Bayesian joint modeling framework for zero-inflated longitudinal count data and time-to-event outcomes, explicitly incorporating a cure fraction to account for subjects who never experience the event. The…

Methodology · Statistics 2025-08-27 Taban Baghfalaki , Mojtaba Ganjali

Hospital-acquired infections of communicable viral diseases (CVDs) are posing a tremendous challenge to healthcare workers globally. Healthcare personnel (HCP) is facing a consistent risk of hospital-acquired infections, and subsequently…

Applications · Statistics 2021-11-11 Phat K. Huynh , Arveity R. Setty , Om P. Yadav , Trung Q. Le

Predicting the risk of death for chronic patients is highly valuable for informed medical decision-making. This paper proposes a general framework for dynamic prediction of the risk of death of a patient given her hospitalization history,…

Methodology · Statistics 2024-10-31 Telmo J. Pérez-Izquierdo , Irantzu Barrio , Cristobal Esteban

The emergence and spread of deadly pandemics has repeatedly occurred throughout history, causing widespread infections and loss of life. The rapid spread of pandemics have made governments across the world adopt a range of actions,…

Populations and Evolution · Quantitative Biology 2024-01-15 Marianna Karapitta , Andreas Kasis , Charithea Stylianides , Kleanthis Malialis , Panayiotis Kolios

The analysis of complex longitudinal data such as COVID-19 deaths is challenging due to several inherent features: (i) Similarly-shaped profiles with different decay patterns; (ii) Unexplained variation among repeated measurements within…

Mediation analysis is an increasingly popular statistical method for explaining causal pathways to inform intervention. While methods have increased, there is still a dearth of robust mediation methods for count outcomes with excess zeroes.…

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