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The coupled dynamics of entangled polymers which span a broad time and length scales govern the unique viscoelastic properties of polymers. To follow chain mobility by numerical simulations from the intermediate Rouse and reptation regimes…

Soft Condensed Matter · Physics 2016-11-03 Gary S. Grest

We study surface effects in amorphous polymer systems by means of computer simulation. In the framework of molecular dynamics, we present two different methods to prepare such surfaces. {\em Free} surfaces are stabilized solely by…

Condensed Matter · Physics 2009-10-28 Thorsten Hapke , Andreas Linke , Gerald Paetzold , Dieter W. Heermann

We study the deformation of nano--scale polymer films which are subject to external bending forces by means of computer simulation. The polymer is represented by a generalized bead--spring--model, intended to reproduce characteristic…

Condensed Matter · Physics 2015-06-25 Gerald Paetzold , Thorsten Hapke , Andreas Linke , Dieter W. Heermann

This paper reports the force spectroscopy analysis of a polymer that translocates from one side of a membrane to the other side through an extended pore, pulled by a cantilever that moves with constant velocity against the damping and the…

Soft Condensed Matter · Physics 2018-12-12 Alessandro Fiasconaro , Fernando Falo

Quantum Mechanics/Molecular Mechanics (QM/MM) simulations are a popular approach to study various features of large systems. A common application of QM/MM calculations is in the investigation of reaction mechanisms in condensed-phase and…

Chemical Physics · Physics 2020-10-29 Jorge Nochebuena , Sehr Naseem-Khan , G. Andrés Cisneros

The formation of chain-folded structures from the melt is observed in molecular dynamics simulations resembling the lamellae of polymer crystals. Crystallization and subsequent melting temperatures are related linearly to the inverse…

Soft Condensed Matter · Physics 2009-10-31 Hendrik Meyer , Florian Mueller-Plathe

We study the dynamics of a polymer that is pulled by a constant force through a viscoelastic medium. This is a model for a polymer being pulled through a cell by an external force, or for an active biopolymer moving due to a self generated…

Soft Condensed Matter · Physics 2015-06-22 Hans Vandebroek , Carlo Vanderzande

When a crack interacts with material heterogeneities, its front distorts and adopts complex tortuous configurations that are reminiscent of the energy barriers encountered during crack propagation. As such, the study of crack front…

Materials Science · Physics 2023-01-03 Mathias Lebihain , Thibault Roch , Jean-François Molinari

We combine molecular dynamics simulations of deformations at the submicron scale with a continuum fracture mechanics calculation for the onset of crack propagation to predict the macroscopic fracture toughness of amorphous glassy polymers.…

Materials Science · Physics 2009-11-07 Jörg Rottler , Sandra Barsky , Mark O. Robbins

We consider forces acting on objects immersed in, or attached to, long fluctuating polymers. The confinement of the polymer by the obstacles results in polymer-mediated forces that can be repulsive (due to loss of entropy) or attractive (if…

Statistical Mechanics · Physics 2017-08-28 Yacov Kantor , Mehran Kardar

The present contribution deals with the thermomechanical modeling of the strain-induced crystallization in unfilled polymers. This phenomenon significantly influences mechanical and thermal properties of polymers and has to be taken into…

Soft Condensed Matter · Physics 2020-11-11 Serhat Aygün , Sandra Klinge

Models that invoke nonlinear wavefront propagation in a chemically excitable medium are rife in the biological literature. Indeed, the idea that wavefront propagation can serve as a signaling mechanism has often been invoked to explain…

Soft Condensed Matter · Physics 2014-11-20 Timon Idema , Andrea J. Liu

Recent developments of microscopic mechanical experiments allow the manipulation of individual polymer molecules in two main ways: \textit{uniform} stretching by external forces and \textit{non-uniform} stretching by external fields. Many…

Biological Physics · Physics 2015-06-11 Fabio Manca , Stefano Giordano , Pier Luca Palla , Fabrizio Cleri , Luciano Colombo

Ploughing phenomena occurring during precise machining processes affect the formation of surface finish and progress of tool wear. Therefore, this study presents an evaluation of ploughing phenomenon by studying the ploughing forces in tool…

We present an approach to studying directed polymers in interaction with a defect line and subject to a force, which pulls them away from the line. We consider in particular the case of inhomogeneous interactions. We first give a formula…

Disordered Systems and Neural Networks · Physics 2009-11-11 G. Giacomin , F. L. Toninelli

The mechanical response of elastic porous media confined within rigid geometries is central to a wide range of industrial, geological, and biomedical systems. However, current models for these problems typically overlook the role of wall…

Soft Condensed Matter · Physics 2026-03-12 Térence Desclaux , Callum Cuttle , Chris W. MacMinn , Olivier Liot

We formulate and characterize a model to describe the dynamics of semiflexible polymers in the presence of activity due to motor proteins attached irreversibly to a substrate, and a transverse pulling force acting on one end of the…

Biological Physics · Physics 2016-02-12 Abhishek Chaudhuri , Debasish Chaudhuri

Thermal welding of polymer-polymer interfaces is important for integrating polymeric elements into devices. When two different polymers are joined, the strength of the weld depends critically on the degree of immiscibility. We perform…

Soft Condensed Matter · Physics 2013-10-16 Ting Ge , Gary S. Grest , Mark O. Robbins

Self-mated hydrogel contacts show extremely small friction coefficients at low loads but a distinct velocity dependence. Here we combine mesoscopic simulations and experiments to test the polymer-relaxation hypothesis for this velocity…

Soft Condensed Matter · Physics 2023-05-30 Jan Mees , Rok Simič , Thomas C. O'Connor , Nicholas D. Spencer , Lars Pastewka

A small amount of polymer additives can cause substantial reduction in the energy dissipation and friction loss of turbulent flow. The problem of polymer-induced drag reduction has attracted continuous attention over the seven decades since…

Fluid Dynamics · Physics 2019-12-30 Li Xi