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In this paper, we describe Function Assistant, a lightweight Python-based toolkit for querying and exploring source code repositories using natural language. The toolkit is designed to help end-users of a target API quickly find information…

Computation and Language · Computer Science 2018-07-12 Kyle Richardson , Jonas Kuhn

Scientific advancement relies on the ability to share and reproduce results. When data analysis or calculations are carried out using software written by scientists there are special challenges around code versions, quality and code…

Software Engineering · Computer Science 2025-07-09 S. Lee , C. Myers , A. Yang , T. Zhang , S. J. L. Billinge

Automated documentation of programming source code is a challenging task with significant practical and scientific implications for the developer community. We present a large language model (LLM)-based application that developers can use…

Software Engineering · Computer Science 2025-12-17 Sayak Chakrabarty , Souradip Pal

With the rapid growth of the volume of research fields like computer vision and computer graphics, researchers require effective and user-friendly rendering tools to visualize results. While advanced tools like Blender offer powerful…

Computer Vision and Pattern Recognition · Computer Science 2024-10-24 Vladimir Guzov , Ilya A. Petrov , Gerard Pons-Moll

PySEMTools is a Python-based library for post-processing simulation data produced with high-order hexahedral elements in the context of the spectral element method in computational fluid dynamics. It aims to minimize intermediate steps…

Computational Physics · Physics 2025-04-18 Adalberto Perez , Siavash Toosi , Tim Felle Olsen , Stefano Markidis , Philipp Schlatter

While there exist approaches to integrate heterogeneous data using semantic models, such semantic models can typically not be used by existing software tools. Many software tools - especially in engineering - only have options to import and…

Databases · Computer Science 2022-11-07 Aljosha Köcher , Artan Markaj , Alexander Fay

We propose a Makefile for developing containerized $\LaTeX$ technical documents. The Makefile allows the author to execute the code that generates variables, tables and figures (results), which are then used during the $\LaTeX$ compilation,…

Software Engineering · Computer Science 2023-11-14 Paschalis Bizopoulos

Scientific journals are very important in recording the finding from researchers around the world. The recent media to disseminate scientific journals is PDF. On scheme to find the scientific journals over the internet is via metadata.…

Digital Libraries · Computer Science 2013-08-01 Leon Andretti Abdillah

Currently, a substantial volume of document data exists in an unstructured format, encompassing Portable Document Format (PDF) files and images. Extracting information from these documents presents formidable challenges due to diverse table…

Computer Vision and Pattern Recognition · Computer Science 2024-09-10 Lei Sheng , Shuai-Shuai Xu

This paper presents CodeRefine, a novel framework for automatically transforming research paper methodologies into functional code using Large Language Models (LLMs). Our multi-step approach first extracts and summarizes key text chunks…

Computation and Language · Computer Science 2026-03-27 Ekaterina Trofimova , Emil Sataev , Abhijit Singh Jowhari

jq is a widely used tool that provides a programming language to manipulate JSON data. However, the jq language is currently only specified by its implementation, making it difficult to reason about its behaviour. To this end, we provide a…

Logic in Computer Science · Computer Science 2024-04-01 Michael Färber

In this work, we present a visualisation tool that is able to process Coq proof scripts and generate a table representation of the contained proofs as $\LaTeX$ or PDF files. This tool has the aim to support both education and review…

Logic in Computer Science · Computer Science 2021-01-20 Mario Frank

Any cutting-edge scientific research project requires a myriad of computational tools for data generation, management, analysis and visualization. Python is a flexible and extensible scientific programming platform that offered the perfect…

Quantitative Methods · Quantitative Biology 2008-03-14 Julius B. Lucks

Deep learning based recommender systems have been extensively explored in recent years. However, the large number of models proposed each year poses a big challenge for both researchers and practitioners in reproducing the results for…

Information Retrieval · Computer Science 2019-05-28 Shuai Zhang , Yi Tay , Lina Yao , Bin Wu , Aixin Sun

As scientific work becomes more computational and data intensive, research processes and results become more difficult to interpret and reproduce. In this poster, we show how the Jupyter notebook, a tool originally designed as a free…

Digital Libraries · Computer Science 2018-04-17 Bernadette M. Boscoe , Irene V. Pasquetto , Milena S. Golshan , Christine L. Borgman

Screening is a time-consuming and labour-intensive yet required task for medical systematic reviews, as tens of thousands of studies often need to be screened. Prioritising relevant studies to be screened allows downstream systematic review…

Information Retrieval · Computer Science 2025-02-06 Xinyu Mao , Teerapong Leelanupab , Harrisen Scells , Guido Zuccon

This article introduces Unsub Extender, a free tool to help libraries analyze their Unsub data export files. Unsub is a collection development dashboard that gathers and forecasts journal-level usage metrics to provide academic libraries…

Digital Libraries · Computer Science 2022-10-26 Eric Schares

This paper introduces $\textit{arfpy}$, a python implementation of Adversarial Random Forests (ARF) (Watson et al., 2023), which is a lightweight procedure for synthesizing new data that resembles some given data. The software…

Machine Learning · Statistics 2023-11-14 Kristin Blesch , Marvin N. Wright

PDF is one of the most prominent data formats, making PDF parsing crucial for information extraction and retrieval, particularly with the rise of RAG systems. While various PDF parsing tools exist, their effectiveness across different…

Information Retrieval · Computer Science 2025-04-04 Narayan S. Adhikari , Shradha Agarwal

We address the extraction of mathematical statements and their proofs from scholarly PDF articles as a multimodal classification problem, utilizing text, font features, and bitmap image renderings of PDFs as distinct modalities. We propose…

Artificial Intelligence · Computer Science 2024-10-14 Shrey Mishra , Antoine Gauquier , Pierre Senellart