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Network embedding methods aim at learning low-dimensional latent representation of nodes in a network. While achieving competitive performance on a variety of network inference tasks such as node classification and link prediction, these…

Social and Information Networks · Computer Science 2018-09-17 Haochen Chen , Xiaofei Sun , Yingtao Tian , Bryan Perozzi , Muhao Chen , Steven Skiena

Hypergraph neural networks can model multi-way connections among nodes of the graphs, which are common in real-world applications such as genetic medicine. In particular, genetic pathways or gene sets encode molecular functions driven by…

Machine Learning · Computer Science 2022-10-17 Yuan Luo

Graph Neural Networks (GNNs) have emerged as the predominant approach for learning over graph-structured data. However, most GNNs operate as black-box models and require post-hoc explanations, which may not suffice in high-stakes scenarios…

Machine Learning · Computer Science 2025-10-14 Maya Bechler-Speicher , Amir Globerson , Ran Gilad-Bachrach

Graph is a universe data structure that is widely used to organize data in real-world. Various real-word networks like the transportation network, social and academic network can be represented by graphs. Recent years have witnessed the…

Machine Learning · Computer Science 2021-11-23 Xueyi Liu , Jie Tang

We propose a neural embedding algorithm called Network Vector, which learns distributed representations of nodes and the entire networks simultaneously. By embedding networks in a low-dimensional space, the algorithm allows us to compare…

Social and Information Networks · Computer Science 2017-09-11 Hao Wu , Kristina Lerman

Heterogeneous graphs (HGs) also known as heterogeneous information networks have become ubiquitous in real-world scenarios; therefore, HG embedding, which aims to learn representations in a lower-dimension space while preserving the…

Social and Information Networks · Computer Science 2020-12-02 Xiao Wang , Deyu Bo , Chuan Shi , Shaohua Fan , Yanfang Ye , Philip S. Yu

Visualizing high-dimensional data has been a focus in data analysis communities for decades, which has led to the design of many algorithms, some of which are now considered references (such as t-SNE for example). In our era of overwhelming…

Machine Learning · Computer Science 2017-02-21 Johan Paratte , Nathanaël Perraudin , Pierre Vandergheynst

Graph embeddings have become a key and widely used technique within the field of graph mining, proving to be successful across a broad range of domains including social, citation, transportation and biological. Graph embedding techniques…

Machine Learning · Computer Science 2018-06-21 Stephen Bonner , Ibad Kureshi , John Brennan , Georgios Theodoropoulos , Andrew Stephen McGough , Boguslaw Obara

Knowledge graph embeddings are now a widely adopted approach to knowledge representation in which entities and relationships are embedded in vector spaces. In this chapter, we introduce the reader to the concept of knowledge graph…

Artificial Intelligence · Computer Science 2020-05-01 Federico Bianchi , Gaetano Rossiello , Luca Costabello , Matteo Palmonari , Pasquale Minervini

Human brains lie at the core of complex neurobiological systems, where the neurons, circuits, and subsystems interact in enigmatic ways. Understanding the structural and functional mechanisms of the brain has long been an intriguing pursuit…

Neurons and Cognition · Quantitative Biology 2022-07-26 Hejie Cui , Wei Dai , Yanqiao Zhu , Xiaoxiao Li , Lifang He , Carl Yang

Network embedding is aimed at mapping nodes in a network into low-dimensional vector representations. Graph Neural Networks (GNNs) have received widespread attention and lead to state-of-the-art performance in learning node representations.…

Social and Information Networks · Computer Science 2023-03-17 Junjie Huang , Huawei Shen , Liang Hou , Xueqi Cheng

Dimensionality reduction techniques map data represented on higher dimensions onto lower dimensions with varying degrees of information loss. Graph dimensionality reduction techniques adopt the same principle of providing latent…

Machine Learning · Computer Science 2022-11-11 Akhil Pandey Akella

Most of the existing graph embedding methods focus on nodes, which aim to output a vector representation for each node in the graph such that two nodes being "close" on the graph are close too in the low-dimensional space. Despite the…

Social and Information Networks · Computer Science 2019-02-13 Vincent W. Zheng , Sandro Cavallari , Hongyun Cai , Kevin Chen-Chuan Chang , Erik Cambria

Social network analysis is an important problem in data mining. A fundamental step for analyzing social networks is to encode network data into low-dimensional representations, i.e., network embeddings, so that the network topology…

Social and Information Networks · Computer Science 2019-04-19 Qiaoyu Tan , Ninghao Liu , Xia Hu

A collaborative network is a social network that is comprised of experts who cooperate with each other to fulfill a special goal. Analyzing this network yields meaningful information about the expertise of these experts and their subject…

Social and Information Networks · Computer Science 2021-04-14 N. Nikzad-Khasmakhi , M. A. Balafar , M. Reza Feizi-Derakhshi , Cina Motamed

Learning effective embedding has been proved to be useful in many real-world problems, such as recommender systems, search ranking and online advertisement. However, one of the challenges is data sparsity in learning large-scale item…

Machine Learning · Computer Science 2019-05-27 Yi Ouyang , Bin Guo , Xing Tang , Xiuqiang He , Jian Xiong , Zhiwen Yu

Complex networks represented as node adjacency matrices constrains the application of machine learning and parallel algorithms. To address this limitation, network embedding (i.e., graph representation) has been intensively studied to learn…

Social and Information Networks · Computer Science 2019-10-24 Huang Zhenhua , Wang Zhenyu , Zhang Rui , Zhao Yangyang , Xie Xiaohui , Sharad Mehrotra

Developing models that can learn to reason is a notoriously challenging problem. We focus on reasoning in relational domains, where the use of Graph Neural Networks (GNNs) seems like a natural choice. However, previous work has shown that…

Artificial Intelligence · Computer Science 2025-03-03 Irtaza Khalid , Steven Schockaert

Network embedding is a very important method for network data. However, most of the algorithms can only deal with static networks. In this paper, we propose an algorithm Recurrent Neural Network Embedding (RNNE) to deal with dynamic…

Machine Learning · Computer Science 2020-07-01 Haiwei Huang , Jinlong Li , Huimin He , Huanhuan Chen

As an intuitive description of complex physical, social, or brain systems, complex networks have fascinated scientists for decades. Recently, to abstract a network's structural and dynamical attributes for utilization, network…

Social and Information Networks · Computer Science 2022-10-21 Yue Deng