Related papers: Finding a reconfiguration sequence between longest…
Given a graph $G$, and terminal vertices $s$ and $t$, the TRACKING PATHS problem asks to compute a minimum number of vertices to be marked as trackers, such that the sequence of trackers encountered in each s-t path is unique. TRACKING…
Reducing the conditions under which a given set satisfies the stipulations of the subset sum proposition to a set of linear relationships, the question of whether a set satisfies subset sum may be answered in a polynomial number of steps by…
We study the space requirements of a sorting algorithm where only items that at the end will be adjacent are kept together. This is equivalent to the following combinatorial problem: Consider a string of fixed length n that starts as a…
For an arbitrary tree we investigate the problems of constructing a maximum matching which minimizes or maximizes the cardinality of a maximum matching of the graph obtained from original one by its removal and present corresponding…
The densest $k$-subgraph problem is the problem of finding a $k$-vertex subgraph of a graph with the maximum number of edges. In order to solve large instances of the densest $k$-subgraph problem, we introduce two algorithms that are based…
The goal in {\em reconfiguration problems} is to compute a {\em gradual transformation} between two feasible solutions of a problem such that all intermediate solutions are also feasible. In the {\em Matching Reconfiguration Problem} (MRP),…
This paper deals with the problem of finding, for a given graph and a given natural number k, a subgraph of k nodes with a maximum number of edges. This problem is known as the k-cluster problem and it is NP-hard on general graphs as well…
Extremal problems related to the enumeration of graph substructures, such as independent sets, matchings, and induced matchings, have become a prominent area of research with the advancement of graph theory. A subset of vertices is called a…
Understanding spatial correlation is vital in many fields including epidemiology and social science. Lee, Meeks and Pettersson (Stat. Comput. 2021) recently demonstrated that improved inference for areal unit count data can be achieved by…
We introduce Permutation and Structured Perturbation Inference (PSPI), a new problem formulation that abstracts many graph matching tasks that arise in systems biology. PSPI can be viewed as a robust formulation of the permutation inference…
One powerful technique to solve NP-hard optimization problems in practice is branch-and-reduce search---which is branch-and-bound that intermixes branching with reductions to decrease the input size. While this technique is known to be very…
Graph isomorphism, subgraph isomorphism, and maximum common subgraphs are classical well-investigated objects. Their (parameterized) complexity and efficiently tractable cases have been studied. In the present paper, for a given set of…
The longest common substring problem consists in finding a longest string that appears as a (contiguous) substring of two input strings. We consider the dynamic variant of this problem, in which we are to maintain two dynamic strings $S$…
In machine learning, graph embedding algorithms seek low-dimensional representations of the input network data, thereby allowing for downstream tasks on compressed encodings. Recently, within the framework of network renormalization,…
We consider a learning-augmented framework for NP-hard permutation problems. The algorithm has access to predictions telling, given a pair $u,v$ of elements, whether $u$ is before $v$ or not in an optimal solution. Building on the work of…
The notion of augmenting graphs generalizes Berge's idea of augmenting chains, which was used by Edmonds in his celebrated solution of the maximum matching problem. This problem is a special case of the more general maximum independent set…
In this paper we propose and study a new complexity model for approximation algorithms. The main motivation are practical problems over large data sets that need to be solved many times for different scenarios, e.g., many multicast trees…
The graph isomorphism (GI) problem is the computational problem of finding a permutation of vertices of a given graph $G_1$ that transforms $G_1$ to another given graph $G_2$ and preserves the adjacency. In this work, we propose a quantum…
We study dynamic algorithms for the longest increasing subsequence (\textsf{LIS}) problem. A dynamic \textsf{LIS} algorithm maintains a sequence subject to operations of the following form arriving one by one: (i) insert an element, (ii)…
We consider a natural combinatorial optimization problem on chordal graphs, the class of graphs with no induced cycle of length four or more. A subset of vertices of a chordal graph is (monophonically) convex if it contains the vertices of…