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When designing multidisciplinary tool workflows in visual development environments, researchers and engineers often combine simulation tools which serve a functional purpose and helper tools that merely ensure technical compatibility by,…

Software Engineering · Computer Science 2021-12-01 Dominik Schneider , Alexander Weinert

Satisfactory software performance is essential for the adoption and the success of a product. In organizations that follow traditional software development models (e.g., waterfall), Software Performance Engineering (SPE) involves…

Software Engineering · Computer Science 2022-05-09 Gunnar Kudrjavets , Jeff Thomas , Nachiappan Nagappan

Although reproducibility is a core tenet of the scientific method, it remains challenging to reproduce many results. Surprisingly, this also holds true for computational results in domains such as systems biology where there have been…

Quantitative Methods · Quantitative Biology 2021-04-13 Michael L. Blinov , John H. Gennari , Jonathan R. Karr , Ion I. Moraru , David P. Nickerson , Herbert M. Sauro

Replication of scientific experiments is critical to the advance of science. Unfortunately, the discipline of Computer Science has never treated replication seriously, even though computers are very good at doing the same thing over and…

General Literature · Computer Science 2013-04-15 Ian P. Gent

Representative sampling appears rare in empirical software engineering research. Not all studies need representative samples, but a general lack of representative sampling undermines a scientific field. This article therefore reports a…

Software Engineering · Computer Science 2021-10-22 Sebastian Baltes , Paul Ralph

High-quality research software is a cornerstone of modern scientific progress, enabling researchers to analyze complex data, simulate phenomena, and share reproducible results. However, creating such software requires adherence to best…

Software Engineering · Computer Science 2025-07-23 Nasir U. Eisty , David E. Bernholdt , Alex Koufos , David J. Luet , Miranda Mundt

Almost all research work in computational neuroscience involves software. As researchers try to understand ever more complex systems, there is a continual need for software with new capabilities. Because of the wide range of questions being…

Neurons and Cognition · Quantitative Biology 2013-11-21 Marc-Oliver Gewaltig , Robert Cannon

We present RCE (Remote Component Environment), an open-source framework developed primarily at DLR (German Aerospace Center) that enables its users to construct and execute multidisciplinary engineering workflows comprising multiple…

Computational engineering generates knowledge through the analysis and interpretation of research data, which is produced by computer simulation. Supercomputers produce huge amounts of research data. To address a research question, a lot of…

Information Retrieval · Computer Science 2020-07-15 Björn Schembera , Dorothea Iglezakis

Existing work on the practical impact of software engineering (SE) research examines industrial relevance rather than adoption of study results, hence the question of how results have been practically applied remains open. To answer this…

Software Engineering · Computer Science 2022-09-23 Zoe Kotti , Georgios Gousios , Diomidis Spinellis

The standard nature of computing is currently being challenged by a range of problems that start to hinder technological progress. One of the strategies being proposed to address some of these problems is to develop novel brain-inspired…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-06-03 Giacomo Indiveri

Research software is essential to modern science, yet many research-performing organisations lack coherent policies to support its development, sustainability, and recognition. Despite its central role in research outcomes, research…

Software Engineering · Computer Science 2025-11-27 Michelle Barker , Jeremy Cohen , Pedro Hernández Serrano , Daniel S. Katz , Kim Martin , Dan Rudmann , Hugh Shanahan

Background: Sustainable software engineering (SSE) means creating software in a way that meets present needs without undermining our collective capacity to meet our future needs. It is typically conceptualized as several intersecting…

Software Engineering · Computer Science 2024-04-02 Sean McGuire , Erin Shultz , Bimpe Ayoola , Paul Ralph

Although a standard in natural science, reproducibility has been only episodically applied in experimental computer science. Scientific papers often present a large number of tables, plots and pictures that summarize the obtained results,…

Digital Libraries · Computer Science 2017-09-06 Fernando Chirigati , Rebecca Capone , Dennis Shasha , Remi Rampin , Juliana Freire

Scientific publishing seems to be at a turning point. Its paradigm has stayed basically the same for 300 years but is now challenged by the increasing volume of articles that makes it very hard for scientists to stay up to date in their…

Digital Libraries · Computer Science 2019-10-09 Cristina-Iulia Bucur , Tobias Kuhn , Davide Ceolin

Software now lies at the heart of scholarly research. Here we argue that as well as being important from a methodological perspective, software should, in many instances, be recognised as an output of research, equivalent to an academic…

Computers and Society · Computer Science 2021-12-23 Caroline Jay , Robert Haines , Daniel S. Katz

Software produced for research, published and otherwise, suffers from a number of common problems that make it difficult or impossible to run outside the original institution, or even off the primary developer's computer. We present ten…

Software Engineering · Computer Science 2017-07-05 Morgan Taschuk , Greg Wilson

Numerical algorithms and computational tools are instrumental in navigating and addressing complex simulation and data processing tasks. The exponential growth of metadata and parameter-driven simulations has led to an increasing demand for…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-05-02 Pavan L. Veluvali , Jan Heiland , Peter Benner

Students enrolled in software engineering degrees are generally required to undertake a research project in their final year through which they demonstrate the ability to conduct research, communicate outcomes, and build in-depth expertise…

Software Engineering · Computer Science 2023-02-14 Chetan Arora , Laura Tubino , Andrew Cain , Kevin Lee , Vasudha Malhotra

To help researchers conduct a systematic review or meta-analysis as efficiently and transparently as possible, we designed a tool (ASReview) to accelerate the step of screening titles and abstracts. For many tasks - including but not…