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Analyzing human vasculature and vessel-like, tubular structures, such as airways, is crucial for disease diagnosis and treatment. Current methods often rely on small sub-regions or simplified tree-like structures, rendering analysis of…

Computer Vision and Pattern Recognition · Computer Science 2026-05-05 Chinmay Prabhakar , Bastian Wittmann , Paul Büschl , Hongwei Bran Li , Bjoern Menze , Suprosanna Shit

This paper presents a fully automatic and end-to-end optimised airway segmentation method for thoracic computed tomography, based on the U-Net architecture. We use a simple and low-memory 3D U-Net as backbone, which allows the method to…

Image and Video Processing · Electrical Eng. & Systems 2021-08-04 A. Garcia-Uceda , R. Selvan , Z. Saghir , H. A. W. M. Tiddens , M. de Bruijne

Methodological contributions: This paper introduces a family of kernels for analyzing (anatomical) trees endowed with vector valued measurements made along the tree. While state-of-the-art graph and tree kernels use combinatorial tree/graph…

Computer Vision and Pattern Recognition · Computer Science 2013-04-09 Aasa Feragen , Jens Petersen , Dominik Grimm , Asger Dirksen , Jesper Holst Pedersen , Karsten Borgwardt , Marleen de Bruijne

We present DeepVesselNet, an architecture tailored to the challenges faced when extracting vessel networks or trees and corresponding features in 3-D angiographic volumes using deep learning. We discuss the problems of low execution speed…

Computer Vision and Pattern Recognition · Computer Science 2019-08-14 Giles Tetteh , Velizar Efremov , Nils D. Forkert , Matthias Schneider , Jan Kirschke , Bruno Weber , Claus Zimmer , Marie Piraud , Bjoern H. Menze

Deep learning models have demonstrated remarkable results for various computer vision tasks, including the realm of medical imaging. However, their application in the medical domain is limited due to the requirement for large amounts of…

Computer Vision and Pattern Recognition · Computer Science 2023-11-14 Aryan Singh , Pepijn Van de Ven , Ciarán Eising , Patrick Denny

In healthcare, accurately classifying medical images is vital, but conventional methods often hinge on medical data with a consistent grid structure, which may restrict their overall performance. Recent medical research has been focused on…

Computer Vision and Pattern Recognition · Computer Science 2023-06-06 Kishore Babu Nampalle , Pradeep Singh , Vivek Narayan Uppala , Sumit Gangwar , Rajesh Singh Negi , Balasubramanian Raman

Delineating 3D blood vessels is essential for clinical diagnosis and treatment, however, is challenging due to complex structure variations and varied imaging conditions. Supervised deep learning has demonstrated its superior capacity in…

Image and Video Processing · Electrical Eng. & Systems 2023-02-08 Huai Chen , Xiuying Wang , Lisheng Wang

The objective of this paper is to significantly reduce the manual workload required from medical professionals in complex 3D segmentation tasks that cannot be yet fully automated. For instance, in radiotherapy planning, organs at risk must…

Content-based retrieval supports a radiologist decision making process by presenting the doctor the most similar cases from the database containing both historical diagnosis and further disease development history. We present a deep…

Information Retrieval · Computer Science 2020-07-15 Ilia Kravets , Tal Heletz , Hayit Greenspan

As in other areas of medical image analysis, e.g. semantic segmentation, deep learning is currently driving the development of new approaches for image registration. Multi-scale encoder-decoder network architectures achieve state-of-the-art…

Computer Vision and Pattern Recognition · Computer Science 2021-03-02 Lasse Hansen , Mattias P. Heinrich

Accurate segmentation of tubular structures in medical images, such as vessels and airway trees, is crucial for computer-aided diagnosis, radiotherapy, and surgical planning. However, significant challenges exist in algorithm design when…

Image and Video Processing · Electrical Eng. & Systems 2025-04-11 Yi Huang , Ke Zhang , Wei Liu , Yuanyuan Wang , Vishal M. Patel , Le Lu , Xu Han , Dakai Jin , Ke Yan

The human lung is a complex respiratory organ, consisting of five distinct anatomic compartments called lobes. Accurate and automatic segmentation of these pulmonary lobes from computed tomography (CT) images is of clinical importance for…

Image and Video Processing · Electrical Eng. & Systems 2019-09-18 Hoileong Lee , Tahreema Matin , Fergus Gleeson , Vicente Grau

Chronic obstructive pulmonary disease (COPD) is a lung disease that is not fully reversible and one of the leading causes of morbidity and mortality in the world. Early detection and diagnosis of COPD can increase the survival rate and…

Image and Video Processing · Electrical Eng. & Systems 2020-01-07 Jalil Ahmed , Sulaiman Vesal , Felix Durlak , Rainer Kaergel , Nishant Ravikumar , Martine Remy-Jardin , Andreas Maier

Pulmonary diseases can cause severe respiratory problems, leading to sudden death if not treated timely. Many researchers have utilized deep learning systems to diagnose pulmonary disorders using chest X-rays (CXRs). However, such systems…

Image and Video Processing · Electrical Eng. & Systems 2022-01-17 Mehreen Sirshar , Taimur Hassan , Muhammad Usman Akram , Shoab Ahmed Khan

Early diagnosis of interstitial lung diseases is crucial for their treatment, but even experienced physicians find it difficult, as their clinical manifestations are similar. In order to assist with the diagnosis, computer-aided diagnosis…

Computer Vision and Pattern Recognition · Computer Science 2016-12-13 Stergios Christodoulidis , Marios Anthimopoulos , Lukas Ebner , Andreas Christe , Stavroula Mougiakakou

The morphology and distribution of airway tree abnormalities enables diagnosis and disease characterisation across a variety of chronic respiratory conditions. In this regard, airway segmentation plays a critical role in the production of…

Purpose: Semantic segmentation and landmark detection are fundamental tasks of medical image processing, facilitating further analysis of anatomical objects. Although deep learning-based pixel-wise classification has set a…

Computer Vision and Pattern Recognition · Computer Science 2024-12-17 Ron Keuth , Lasse Hansen , Maren Balks , Ronja Jäger , Anne-Nele Schröder , Ludger Tüshaus , Mattias Heinrich

Dense annotations, such as segmentation masks, are expensive and time-consuming to obtain, especially for 3D medical images where expert voxel-wise labeling is required. Weakly supervised approaches aim to address this limitation, but often…

Computer Vision and Pattern Recognition · Computer Science 2026-04-21 Richard Petersen , Fredrik Kahl , Jennifer Alvén

Automatic airway segmentation from chest computed tomography (CT) scans plays an important role in pulmonary disease diagnosis and computer-assisted therapy. However, low contrast at peripheral branches and complex tree-like structures…

Image and Video Processing · Electrical Eng. & Systems 2021-02-26 Jinquan Guo , Rongda Fu , Lin Pan , Shaohua Zheng , Liqin Huang , Bin Zheng , Bingwei He

Alterations in the geometry and function of the heart define well-established causes of cardiovascular disease. However, current approaches to the diagnosis of cardiovascular diseases often rely on subjective human assessment as well as…

Computer Vision and Pattern Recognition · Computer Science 2018-07-19 Carlo Biffi , Ozan Oktay , Giacomo Tarroni , Wenjia Bai , Antonio De Marvao , Georgia Doumou , Martin Rajchl , Reem Bedair , Sanjay Prasad , Stuart Cook , Declan O'Regan , Daniel Rueckert