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Many modern sequence alignment tools implement fast string matching using the space efficient data structure called FM-index. The succinct nature of this data structure presents unique challenges for the algorithm designers. In this paper,…

Data Structures and Algorithms · Computer Science 2019-09-04 Roman Snytsar

With emerging storage-class memory (SCM) nearing commercialization, there is evidence that it will deliver the much-anticipated high density and access latencies within only a few factors of DRAM. Nevertheless, the latency-sensitive nature…

This paper details a data structure for managing and scheduling requests for computing resources of clusters and virtualised infrastructure such as private clouds. The data structure uses a red-black tree whose nodes represent the start…

Data Structures and Algorithms · Computer Science 2015-04-06 Marcos Dias de Assuncao

Recent years have witnessed remarkable advances in spatiotemporal predictive learning, with methods incorporating auxiliary inputs, complex neural architectures, and sophisticated training strategies. While SimVP has introduced a simpler,…

Machine Learning · Computer Science 2024-12-13 Cheng Tan , Zhangyang Gao , Siyuan Li , Stan Z. Li

In current microarchitectures, due to the complex memory hierarchies and different latencies on memory accesses, thread and data mapping are important issues to improve application performance. Software transactional memory (STM) is an…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-03-24 Douglas Pereira Pasqualin , Matthias Diener , André Rauber Du Bois , Maurício Lima Pilla

Integrating large language models (LLMs) into closed-loop robotic task planning has become increasingly popular within embodied artificial intelligence. Previous efforts mainly focused on leveraging the strong reasoning abilities of LLMs to…

Robotics · Computer Science 2025-02-17 Chaoyuan Zhang , Zhaowei Li , Wentao Yuan

With the advancement of machine learning and deep learning, vector search becomes instrumental to many information retrieval systems, to search and find best matches to user queries based on their semantic similarities.These online services…

Computer Vision and Pattern Recognition · Computer Science 2018-09-13 Minjia Zhang , Yuxiong He

Optimal multiple sequence alignment by dynamic programming, like many highly dimensional scientific computing problems, has failed to benefit from the improvements in computing performance brought about by multi-processor systems, due to…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-11-30 Manal Helal , Hossam El-Gindy , Lenore Mullin , Bruno Gaeta

Recent work in database query optimization has used complex machine learning strategies, such as customized reinforcement learning schemes. Surprisingly, we show that LLM embeddings of query text contain useful semantic information for…

Databases · Computer Science 2024-11-06 Peter Akioyamen , Zixuan Yi , Ryan Marcus

Processing-in-Memory (PIM) enhances memory with computational capabilities, potentially solving energy and latency issues associated with data transfer between memory and processors. However, managing concurrent computation and data flow…

Hardware Architecture · Computer Science 2025-05-09 Ahmed Mamdouh , Haoran Geng , Michael Niemier , Xiaobo Sharon Hu , Dayane Reis

Efficiently computing spatio-textual queries has become increasingly important in various applications that need to quickly retrieve geolocated entities associated with textual information, such as in location-based services and social…

Data Structures and Algorithms · Computer Science 2023-12-18 Georgios Chatzigeorgakidis , Kostas Patroumpas , Dimitrios Skoutas , Spiros Athanasiou

Stochastic Gradient Descent (SGD) has proven to be remarkably effective in optimizing deep neural networks that employ ever-larger numbers of parameters. Yet, improving the efficiency of large-scale optimization remains a vital and highly…

Machine Learning · Computer Science 2020-11-11 Frithjof Gressmann , Zach Eaton-Rosen , Carlo Luschi

Reinforcement learning (RL) workloads take a notoriously long time to train due to the large number of samples collected at run-time from simulators. Unfortunately, cluster scale-up approaches remain expensive, and commonly used CPU…

Machine Learning · Computer Science 2022-07-19 James Gleeson , Daniel Snider , Yvonne Yang , Moshe Gabel , Eyal de Lara , Gennady Pekhimenko

We consider practical data characteristics underlying federated learning, where unbalanced and non-i.i.d. data from clients have a block-cyclic structure: each cycle contains several blocks, and each client's training data follow…

Machine Learning · Computer Science 2020-02-19 Yucheng Ding , Chaoyue Niu , Yikai Yan , Zhenzhe Zheng , Fan Wu , Guihai Chen , Shaojie Tang , Rongfei Jia

Database administrators construct secondary indexes on data tables to accelerate query processing in relational database management systems (RDBMSs). These indexes are built on top of the most frequently queried columns according to the…

Databases · Computer Science 2019-04-03 Yingjun Wu , Jia Yu , Yuanyuan Tian , Richard Sidle , Ronald Barber

How to integrate and verify spatial intelligence in foundation models remains an open challenge. Current practice often proxies Visual-Spatial Intelligence (VSI) with purely textual prompts and VQA-style scoring, which obscures geometry,…

Computer Vision and Pattern Recognition · Computer Science 2025-10-27 Guanlin Wu , Boyan Su , Yang Zhao , Pu Wang , Yichen Lin , Hao Frank Yang

Recent one-shot Neural Architecture Search algorithms rely on training a hardware-agnostic super-network tailored to a specific task and then extracting efficient sub-networks for different hardware platforms. Popular approaches separate…

Machine Learning · Computer Science 2023-12-22 Sharath Nittur Sridhar , Maciej Szankin , Fang Chen , Sairam Sundaresan , Anthony Sarah

Increasing need for large-scale data analytics in a number of application domains has led to a dramatic rise in the number of distributed data management systems, both parallel relational databases, and systems that support alternative…

Databases · Computer Science 2013-02-19 K. Ashwin Kumar , Amol Deshpande , Samir Khuller

Log-Structured Merge (LSM) Trees provide a tiered data storage and retrieval paradigm that is attractive for write-optimized data systems. Maintaining an efficient buffer in memory and deferring updates past their initial write-time, the…

Databases · Computer Science 2018-09-11 Aron Szanto

There are now over 20 commercial vector database management systems (VDBMSs), all produced within the past five years. But embedding-based retrieval has been studied for over ten years, and similarity search a staggering half century and…

Databases · Computer Science 2023-10-24 James Jie Pan , Jianguo Wang , Guoliang Li