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Ion transport, often described by the Poisson--Nernst--Planck (PNP) equations, is ubiquitous in electrochemical devices and many biological processes of significance. In this work, we develop conservative, positivity-preserving, energy…

Numerical Analysis · Mathematics 2020-07-15 Jie Ding , Zhongming Wang , Shenggao Zhou

Pressure Poisson equation (PPE) reformulations of the incompressible Navier-Stokes equations (NSE) replace the incompressibility constraint by a Poisson equation for the pressure and a suitable choice of boundary conditions. This yields a…

Numerical Analysis · Mathematics 2023-08-16 Rodolfo Ruben Rosales , Benjamin Seibold , David Shirokoff , Dong Zhou

Parameter identification problems in partial differential equations (PDEs) consist in determining one or more functional coefficient in a PDE. In this article, the Bayesian nonparametric approach to such problems is considered. Focusing on…

Statistics Theory · Mathematics 2025-04-24 Matteo Giordano

A simple model of an atomic Bose-Einstein condensate in a box whose size varies with time is studied to determine the nature of adiabaticity in the nonlinear dynamics obtained within the Gross-Pitaevskii equation (the nonlinear Schrodinger…

Statistical Mechanics · Physics 2009-11-07 Y. B. Band , B. Malomed , M. Trippenbach

We consider the use of Gaussian Processes (GPs) or Neural Networks (NNs) to numerically approximate the solutions to nonlinear partial differential equations (PDEs) with rough forcing or source terms, which commonly arise as pathwise…

Numerical Analysis · Mathematics 2025-01-31 Ricardo Baptista , Edoardo Calvello , Matthieu Darcy , Houman Owhadi , Andrew M. Stuart , Xianjin Yang

The collisionless Boltzmann equation (CBE) is a fundamental equation that governs the dynamics of a broad range of astrophysical systems from space plasma to star clusters and galaxies. It is computationally expensive to integrate the CBE…

Quantum Physics · Physics 2024-12-31 Soichiro Yamazaki , Fumio Uchida , Kotaro Fujisawa , Koichi Miyamoto , Naoki Yoshida

We study the sensitivity of infinite-dimensional Bayesian linear inverse problems governed by partial differential equations (PDEs) with respect to modeling uncertainties. In particular, we consider derivative-based sensitivity analysis of…

Numerical Analysis · Mathematics 2024-05-17 Abhijit Chowdhary , Shanyin Tong , Georg Stadler , Alen Alexanderian

Non-Hermitian skin effect (NHSE) is a unique feature studied extensively in non-interacting non-Hermitian systems. In this work, we extend the NHSE originally discovered in non-interacting systems to interacting many-body systems by…

Quantum Gases · Physics 2023-05-03 Liang Mao , Yajiang Hao , Lei Pan

The path-specific effect (PSE) is of primary interest in mediation analysis when multiple intermediate variables between treatment and outcome are observed, as it can isolate the specific effect through each mediator, thus mitigating…

Methodology · Statistics 2025-07-16 Jiawei Shan , Ting Wang , Wei Li , Chunrong Ai

The standard Poisson-Boltzmann model for molecular electrostatics assumes a sharp variation of the permittivity and salt concentration along the solute-solvent interface. The discontinuous field parameters are not only difficult…

Chemical Physics · Physics 2026-04-20 Mauricio Guerrero-Montero , Michal Bosy , Christopher D. Cooper

One of the open problems in scientific computing is the long-time integration of nonlinear stochastic partial differential equations (SPDEs). We address this problem by taking advantage of recent advances in scientific machine learning and…

Machine Learning · Computer Science 2019-09-04 Dongkun Zhang , Ling Guo , George Em Karniadakis

While topological derivatives have proven useful in applications of topology optimisation and inverse problems, their mathematically rigorous derivation remains an ongoing research topic, in particular in the context of nonlinear partial…

Optimization and Control · Mathematics 2022-07-20 Peter Gangl , Kevin Sturm

Consider the Boltzmann equation in a general non-convex domain with the diffuse boundary condition. We establish optimal BV estimates for such solutions. Our method consists of a new $W^{1,1}-$trace estimate for the diffuse boundary…

Analysis of PDEs · Mathematics 2018-09-11 Yan Guo , Chanwoo Kim , Daniela Tonon , Ariane Trescases

An equation-by-equation (EBE) method is proposed to solve a system of nonlinear equations arising from the moment constrained maximum entropy problem of multidimensional variables. The design of the EBE method combines ideas from homotopy…

Numerical Analysis · Mathematics 2018-07-04 Wenrui Hao , John Harlim

For multispecies ions, we study boundary layer solutions of charge conserving Poisson-Boltzmann (CCPB) equations [50] (with a small parameter \k{o}) over a finite one-dimensional (1D) spatial domain, subjected to Robin type boundary…

Analysis of PDEs · Mathematics 2015-04-28 Chiun-Chang Lee , Hijin Lee , YunKyong Hyon , Tai-Chia Lin , Chun Liu

We establish a comparison principle for viscosity solutions of a class of nonlinear partial differential equations posed on the space of nonnegative finite measures, thereby extending recent results for PDEs defined on the Wasserstein space…

Probability · Mathematics 2026-05-05 Ibrahim Ekren , Xihao He , Tianxu Lan , Xiaolu Tan

In this paper we consider the estimation of unknown parameters in Bayesian inverse problems. In most cases of practical interest, there are several barriers to performing such estimation, This includes a numerical approximation of a…

Methodology · Statistics 2025-02-07 Neil K. Chada , Ajay Jasra , Mohamed Maama , Raul Tempone

Poisson's equation has been used in VLSI global placement for describing the potential field caused by a given charge density distribution. Unlike previous global placement methods that solve Poisson's equation numerically, in this paper,…

Other Computer Science · Computer Science 2023-07-25 Wenxing Zhu , Zhipeng Huang , Jianli Chen , Yao-Wen Chang

In this paper, we solve the linearized Poisson-Boltzmann equation, used to model the electric potential of macromolecules in a solvent. We derive a corrected trapezoidal rule with improved accuracy for a boundary integral formulation of the…

Numerical Analysis · Mathematics 2022-10-10 Federico Izzo , Yimin Zhong , Olof Runborg , Richard Tsai

We introduce a flexible, scalable Bayesian inference framework for nonlinear dynamical systems characterised by distinct and hierarchical variability at the individual, group, and population levels. Our model class is a generalisation of…

Machine Learning · Statistics 2019-10-03 Geoffrey Roeder , Paul K. Grant , Andrew Phillips , Neil Dalchau , Edward Meeds