Related papers: Cut a Numeric String into Required Pieces
Tasks that model the relation between pairs of tokens in a string are a vital part of understanding natural language. Such tasks, in general, require exhaustive pair-wise comparisons of tokens, thus having a quadratic runtime complexity in…
Approximate string matching is the problem of finding all factors of a text t of length n that are at a distance at most k from a pattern x of length m. Approximate circular string matching is the problem of finding all factors of t that…
We study the problem Symmetric Directed Multicut from a parameterized complexity perspective. In this problem, the input is a digraph $D$, a set of cut requests $C=\{(s_1,t_1),\ldots,(s_\ell,t_\ell)\}$ and an integer $k$, and the task is to…
Algorithmic statistics considers the following problem: given a binary string $x$ (e.g., some experimental data), find a "good" explanation of this data. It uses algorithmic information theory to define formally what is a good explanation.…
Repeat finding in strings has important applications in subfields such as computational biology. Surprisingly, all prior work on repeat finding did not consider the constraint on the locality of repeats. In this paper, we propose and study…
Let $G=(V,E)$ be a graph on $n$ vertices and $R$ be a set of pairs of vertices in $V$ called \emph{requests}. A \emph{multicut} is a subset $F$ of $E$ such that every request $xy$ of $R$ is cut by $F$, \i.e. every $xy$-path of $G$…
The \textsc{Bipartite Contraction} problem is to decide, given a graph $G$ and a parameter $k$, whether we can can obtain a bipartite graph from $G$ by at most $k$ edge contractions. The fixed-parameter tractability of the problem was shown…
We address the problem of counting the number of strings in a collection where a given pattern appears, which has applications in information retrieval and data mining. Existing solutions are in a theoretical stage. We implement these…
We study the proportional chore division problem where a protocol wants to divide an undesirable object, called chore, among $n$ different players. The goal is to find an allocation such that the cost of the chore assigned to each player be…
Perfect Matching-Cut is the problem of deciding whether a graph has a perfect matching that contains an edge-cut. We show that this problem is NP-complete for planar graphs with maximum degree four, for planar graphs with girth five, for…
We present new, faster pseudopolynomial time algorithms for the $k$-Subset Sum problem, defined as follows: given a set $Z$ of $n$ positive integers and $k$ targets $t_1, \ldots, t_k$, determine whether there exist $k$ disjoint subsets…
We consider the longest common subsequence (LCS) problem with the restriction that the common subsequence is required to consist of at least $k$ length substrings. First, we show an $O(mn)$ time algorithm for the problem which gives a…
Monotonicity is a simple yet significant qualitative characteristic. We consider the problem of segmenting a sequence in up to K segments. We want segments to be as monotonic as possible and to alternate signs. We propose a quality metric…
We consider the problem of inserting a new item into an ordered list of N-1 items. The length of an algorithm is measured by the number of comparisons it makes between the new item and items already on the list. Classically, determining the…
A decision tree recursively splits a feature space $\mathbb{R}^{d}$ and then assigns class labels based on the resulting partition. Decision trees have been part of the basic machine-learning toolkit for decades. A large body of work treats…
In the trace reconstruction problem, the goal is to reconstruct an unknown string $x$ of length $n$ from multiple traces obtained by passing $x$ through the deletion channel. In the relaxed problem of $approximate$ trace reconstruction, the…
Enumeration algorithms have been one of recent hot topics in theoretical computer science. Different from other problems, enumeration has many interesting aspects, such as the computation time can be shorter than the total output size, by…
In the bounded-degree cut problem, we are given a multigraph $G=(V,E)$, two disjoint vertex subsets $A,B\subseteq V$, two functions $\mathrm{u}_A, \mathrm{u}_B:V\to \{0,1,\ldots,|E|\}$ on $V$, and an integer $k\geq 0$. The task is to…
This paper considers the one-dimensional cutting stock problem with divisible items, which is a new problem in the cutting stock literature. The problem exists in steel industries. In the new problem, each item can be divided into smaller…
A string $S[1,n]$ is a power (or tandem repeat) of order $k$ and period $n/k$ if it can decomposed into $k$ consecutive equal-length blocks of letters. Powers and periods are fundamental to string processing, and algorithms for their…