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Transformers have made remarkable progress towards modeling long-range dependencies within the medical image analysis domain. However, current transformer-based models suffer from several disadvantages: (1) existing methods fail to capture…

Computer Vision and Pattern Recognition · Computer Science 2022-12-16 Chenyu You , Ruihan Zhao , Fenglin Liu , Siyuan Dong , Sandeep Chinchali , Ufuk Topcu , Lawrence Staib , James S. Duncan

Biomedical image segmentation is a very important part in disease diagnosis. The term "colonic polyps" refers to polypoid lesions that occur on the surface of the colonic mucosa within the intestinal lumen. In clinical practice, early…

Image and Video Processing · Electrical Eng. & Systems 2024-04-02 Chen Peng , Zhiqin Qian , Kunyu Wang , Qi Luo , Zhuming Bi , Wenjun Zhang

Accurate segmentation of cardiac substructures on computed tomography (CT) scans is essential for radiotherapy planning but typically requires large annotated datasets and often generalizes poorly across imaging protocols and patient…

Image and Video Processing · Electrical Eng. & Systems 2026-02-26 Aneesh Rangnekar , Nikhil Mankuzhy , Jonas Willmann , Chloe Min Seo Choi , Abraham Wu , Maria Thor , Andreas Rimner , Harini Veeraraghavan

Segmentation of the airway tree from chest computed tomography (CT) images is critical for quantitative assessment of airway diseases including bronchiectasis and chronic obstructive pulmonary disease (COPD). However, obtaining an accurate…

Computer Vision and Pattern Recognition · Computer Science 2018-08-15 A. Garcia-Uceda Juarez , H. A. W. M. Tiddens , M. de Bruijne

Deep Neural Networks (DNNs) are widely used for decision making in a myriad of critical applications, ranging from medical to societal and even judicial. Given the importance of these decisions, it is crucial for us to be able to interpret…

Computer Vision and Pattern Recognition · Computer Science 2022-11-28 Teddy Koker , Fatemehsadat Mireshghallah , Tom Titcombe , Georgios Kaissis

Image segmentation is pivotal in medical image analysis, facilitating clinical diagnosis, treatment planning, and disease evaluation. Deep learning has significantly advanced automatic segmentation methodologies by providing superior…

Image and Video Processing · Electrical Eng. & Systems 2026-01-22 Zhengyong Huang , Ning Jiang , Xingwen Sun , Lihua Zhang , Peng Chen , Jens Domke , Yao Sui

The manual ground truth of abdominal multi-organ is labor-intensive. In order to make full use of CT data, we developed a semi-supervised learning based dual-light UNet. In the training phase, it consists of two light UNets, which make full…

Image and Video Processing · Electrical Eng. & Systems 2022-09-23 Haoran Lai , Tao Wang , Shuoling Zhou

Computed Tomography (CT) based precise prostate segmentation for treatment planning is challenging due to (1) the unclear boundary of the prostate derived from CT's poor soft tissue contrast and (2) the limitation of convolutional neural…

Image and Video Processing · Electrical Eng. & Systems 2023-07-20 Chengyin Li , Yao Qiang , Rafi Ibn Sultan , Hassan Bagher-Ebadian , Prashant Khanduri , Indrin J. Chetty , Dongxiao Zhu

Image registration is an essential technique for the analysis of Computed Tomography (CT) images in clinical practice. However, existing methodologies are predominantly tailored to a specific organ of interest and often exhibit lower…

Computer Vision and Pattern Recognition · Computer Science 2025-03-31 Xuan Loc Pham , Mathias Prokop , Bram van Ginneken , Alessa Hering

In this paper, we propose a novel technique for sampling sequential images using a cylindrical transform in a cylindrical coordinate system for kidney semantic segmentation in abdominal computed tomography (CT). The images generated from a…

Computer Vision and Pattern Recognition · Computer Science 2018-09-28 Hojjat Salehinejad , Sumeya Naqvi , Errol Colak , Joseph Barfett , Shahrokh Valaee

Convolutional Neural Networks (CNNs) work very well for supervised learning problems when the training dataset is representative of the variations expected to be encountered at test time. In medical image segmentation, this premise is…

Image and Video Processing · Electrical Eng. & Systems 2021-01-26 Neerav Karani , Ertunc Erdil , Krishna Chaitanya , Ender Konukoglu

Organ segmentation in CT volumes is an important pre-processing step in many computer assisted intervention and diagnosis methods. In recent years, convolutional neural networks have dominated the state of the art in this task. However,…

Image and Video Processing · Electrical Eng. & Systems 2020-12-08 Roger D. Soberanis-Mukul , Nassir Navab , Shadi Albarqouni

Purpose: To develop and evaluate a deep learning model for multi-organ segmentation of MRI scans. Materials and Methods: The model was trained on 1,200 manually annotated 3D axial MRI scans from the UK Biobank, 221 in-house MRI scans, and…

This paper proposes a method MTL-Swin-Unet which is multi-task learning using transformers for classification and semantic segmentation. For spurious-correlation problems, this method allows us to enhance the image representation with two…

Machine Learning · Computer Science 2025-05-14 Kodai Hirata , Tsuyoshi Okita

Brain tumor segmentation is one of the most challenging problems in medical image analysis. The goal of brain tumor segmentation is to generate accurate delineation of brain tumor regions. In recent years, deep learning methods have shown…

Image and Video Processing · Electrical Eng. & Systems 2021-11-18 Zhihua Liu , Lei Tong , Zheheng Jiang , Long Chen , Feixiang Zhou , Qianni Zhang , Xiangrong Zhang , Yaochu Jin , Huiyu Zhou

Abdominal organ segmentation has many important clinical applications, such as organ quantification, surgical planning, and disease diagnosis. However, manually annotating organs from CT scans is time-consuming and labor-intensive.…

Computer Vision and Pattern Recognition · Computer Science 2022-10-19 Wentao Liu , Weijin Xu , Songlin Yan , Lemeng Wang , Haoyuan Li , Huihua Yang

Bladder cancer ranks within the top 10 most diagnosed cancers worldwide and is among the most expensive cancers to treat due to the high recurrence rates which require lifetime follow-ups. The primary tool for diagnosis is cystoscopy, which…

Computer Vision and Pattern Recognition · Computer Science 2024-03-07 Meryem Amaouche , Ouassim Karrakchou , Mounir Ghogho , Anouar El Ghazzaly , Mohamed Alami , Ahmed Ameur

Brain tumour segmentation plays a key role in computer-assisted surgery. Deep neural networks have increased the accuracy of automatic segmentation significantly, however these models tend to generalise poorly to different imaging…

Computer Vision and Pattern Recognition · Computer Science 2017-09-06 Lucas Fidon , Wenqi Li , Luis C. Garcia-Peraza-Herrera , Jinendra Ekanayake , Neil Kitchen , Sebastien Ourselin , Tom Vercauteren

The performance of deep learning-based methods strongly relies on the number of datasets used for training. Many efforts have been made to increase the data in the medical image analysis field. However, unlike photography images, it is hard…

Image and Video Processing · Electrical Eng. & Systems 2020-09-29 Pochuan Wang , Chen Shen , Holger R. Roth , Dong Yang , Daguang Xu , Masahiro Oda , Kazunari Misawa , Po-Ting Chen , Kao-Lang Liu , Wei-Chih Liao , Weichung Wang , Kensaku Mori

Abdominal fat quantification is critical since multiple vital organs are located within this region. Although computed tomography (CT) is a highly sensitive modality to segment body fat, it involves ionizing radiations which makes magnetic…

Image and Video Processing · Electrical Eng. & Systems 2020-05-13 Samira Masoudi , Syed M. Anwar , Stephanie A. Harmon , Peter L. Choyke , Baris Turkbey , Ulas Bagci