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Knowledge Graph Embeddings (KGE) have become a quite popular class of models specifically devised to deal with ontologies and graph structure data, as they can implicitly encode statistical dependencies between entities and relations in a…

Artificial Intelligence · Computer Science 2023-03-27 Michelangelo Diligenti , Francesco Giannini , Stefano Fioravanti , Caterina Graziani , Moreno Falaschi , Giuseppe Marra

Many Knowledege Graphs (KGs) are frequently updated, forcing their Knowledge Graph Embeddings (KGEs) to adapt to these changes. To address this problem, continual learning techniques for KGEs incorporate embeddings for new entities while…

Machine Learning · Computer Science 2026-05-29 Gerard Pons , Besim Bilalli , Anna Queralt

Knowledge Graphs (KG) and associated Knowledge Graph Embedding (KGE) models have recently begun to be explored in the context of drug discovery and have the potential to assist in key challenges such as target identification. In the drug…

Biomolecules · Quantitative Biology 2022-06-01 Stephen Bonner , Ian P Barrett , Cheng Ye , Rowan Swiers , Ola Engkvist , Charles Tapley Hoyt , William L Hamilton

Knowledge graph (KG) inference aims to address the natural incompleteness of KGs, including rule learning-based and KG embedding (KGE) models. However, the rule learning-based models suffer from low efficiency and generalization while KGE…

Artificial Intelligence · Computer Science 2022-08-23 Guanglin Niu , Bo Li , Yongfei Zhang , Shiliang Pu

Knowledge graph embeddings (KGE) apply machine learning methods on knowledge graphs (KGs) to provide non-classical reasoning capabilities based on similarities and analogies. The learned KG embeddings are typically used to answer queries by…

Artificial Intelligence · Computer Science 2025-01-28 Yuqicheng Zhu , Nico Potyka , Jiarong Pan , Bo Xiong , Yunjie He , Evgeny Kharlamov , Steffen Staab

Knowledge graphs (KGs) play a crucial role in many applications, such as question answering, but incompleteness is an urgent issue for their broad application. Much research in knowledge graph completion (KGC) has been performed to resolve…

Artificial Intelligence · Computer Science 2023-01-10 Yinyu Lan , Shizhu He , Kang Liu , Jun Zhao

The embedding of Biomedical Knowledge Graphs (BKGs) generates robust representations, valuable for a variety of artificial intelligence applications, including predicting drug combinations and reasoning disease-drug relationships.…

Databases · Computer Science 2023-10-17 Zhiguang Fan , Yuedong Yang , Mingyuan Xu , Hongming Chen

Embedding knowledge graphs (KGs) into continuous vector spaces is a focus of current research. Combining such an embedding model with logic rules has recently attracted increasing attention. Most previous attempts made a one-time injection…

Artificial Intelligence · Computer Science 2017-12-01 Shu Guo , Quan Wang , Lihong Wang , Bin Wang , Li Guo

Knowledge Graphs (KGs), representing facts as triples, have been widely adopted in many applications. Reasoning tasks such as link prediction and rule induction are important for the development of KGs. Knowledge Graph Embeddings (KGEs)…

Artificial Intelligence · Computer Science 2021-12-17 Wen Zhang , Shumin Deng , Mingyang Chen , Liang Wang , Qiang Chen , Feiyu Xiong , Xiangwen Liu , Huajun Chen

Knowledge graph embedding (KGE) models encode the structural information of knowledge graphs to predicting new links. Effective training of these models requires distinguishing between positive and negative samples with high precision.…

Machine Learning · Computer Science 2025-04-07 Makoto Takamoto , Daniel Oñoro-Rubio , Wiem Ben Rim , Takashi Maruyama , Bhushan Kotnis

Many mathematical models have been leveraged to design embeddings for representing Knowledge Graph (KG) entities and relations for link prediction and many downstream tasks. These mathematically-inspired models are not only highly scalable…

Artificial Intelligence · Computer Science 2023-09-25 Xiou Ge , Yun-Cheng Wang , Bin Wang , C. -C. Jay Kuo

Extensive adoption of electronic health records (EHRs) offers opportunities for their use in various downstream clinical analyses. To accomplish this purpose, enriching an EHR cohort with external knowledge (e.g., standardized medical…

Machine Learning · Computer Science 2024-06-13 Ahmad Wisnu Mulyadi , Heung-Il Suk

Integrating structured knowledge from Knowledge Graphs (KGs) into Large Language Models (LLMs) remains a key challenge for symbolic reasoning. Existing methods mainly rely on prompt engineering or fine-tuning, which lose structural fidelity…

Machine Learning · Computer Science 2025-05-13 Erica Coppolillo

Knowledge Graph Embedding (KGE) techniques are crucial in learning compact representations of entities and relations within a knowledge graph, facilitating efficient reasoning and knowledge discovery. While existing methods typically focus…

Computation and Language · Computer Science 2024-10-29 Pengcheng Jiang , Lang Cao , Cao Xiao , Parminder Bhatia , Jimeng Sun , Jiawei Han

Knowledge graphs are powerful tools for representing and organising complex biomedical data. Several knowledge graph embedding algorithms have been proposed to learn from and complete knowledge graphs. However, a recent study demonstrates…

To provide more accurate, diverse, and explainable recommendation, it is compulsory to go beyond modeling user-item interactions and take side information into account. Traditional methods like factorization machine (FM) cast it as a…

Machine Learning · Computer Science 2019-06-11 Xiang Wang , Xiangnan He , Yixin Cao , Meng Liu , Tat-Seng Chua

The paper utilizes the graph embeddings generated for entities of a large biomedical database to perform link prediction to capture various new relationships among different entities. A novel node similarity measure is proposed that…

Information Retrieval · Computer Science 2021-11-01 Prakhar Gurawa , Matthias Nickles

Knowledge Graphs (KGs) are a powerful representation of linked data, offering flexibility, semantic richness, and support for knowledge enrichment and reasoning. They help data owners organize and exploit heterogeneous data to provide…

Cryptography and Security · Computer Science 2026-05-20 Yasmine Hayder

Traditional knowledge graph embedding (KGE) methods typically require preserving the entire knowledge graph (KG) with significant training costs when new knowledge emerges. To address this issue, the continual knowledge graph embedding…

Artificial Intelligence · Computer Science 2024-05-08 Jiajun Liu , Wenjun Ke , Peng Wang , Ziyu Shang , Jinhua Gao , Guozheng Li , Ke Ji , Yanhe Liu

Knowledge graph (KG) embedding encodes the entities and relations from a KG into low-dimensional vector spaces to support various applications such as KG completion, question answering, and recommender systems. In real world, knowledge…

Databases · Computer Science 2022-06-02 Tianxing Wu , Arijit Khan , Melvin Yong , Guilin Qi , Meng Wang
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