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Selecting the appropriate dimensionality reduction (DR) technique and determining its optimal hyperparameter settings that maximize the accuracy of the output projections typically involves extensive trial and error, often resulting in…

Human-Computer Interaction · Computer Science 2026-01-13 Hyeon Jeon , Jeongin Park , Soohyun Lee , Dae Hyun Kim , Sungbok Shin , Jinwook Seo

Dimensionality reduction is often used as an initial step in data exploration, either as preprocessing for classification or regression or for visualization. Most dimensionality reduction techniques to date are unsupervised; they do not…

Machine Learning · Statistics 2020-06-17 Jake S. Rhodes , Adele Cutler , Guy Wolf , Kevin R. Moon

Dimensionality reduction is a crucial technique in data analysis, as it allows for the efficient visualization and understanding of high-dimensional datasets. The circular coordinate is one of the topological data analysis techniques…

Algebraic Topology · Mathematics 2023-01-31 Taejin Paik , Jaemin Park

The usage of chemical imaging technologies is becoming a routine accompaniment to traditional methods in pathology. Significant technological advances have developed these next generation techniques to provide rich, spatially resolved,…

Machine Learning · Computer Science 2022-09-07 Spencer A. Thomas

Subspace clustering methods have been widely studied recently. When the inputs are 2-dimensional (2D) data, existing subspace clustering methods usually convert them into vectors, which severely damages inherent structures and relationships…

Computer Vision and Pattern Recognition · Computer Science 2020-11-04 Chong Peng , Qian Zhang , Zhao Kang , Chenglizhao Chen , Qiang Cheng

Dimensionality reduction (DR) is a well-established approach for the visualization of high-dimensional data sets. While DR methods are often applied to typical DR benchmark data sets in the literature, they might suffer from high runtime…

Machine Learning · Computer Science 2024-08-09 Luca Reichmann , David Hägele , Daniel Weiskopf

Dimensionality reduction (DR) plays a vital role in the visual analysis of high-dimensional data. One main aim of DR is to reveal hidden patterns that lie on intrinsic low-dimensional manifolds. However, DR often overlooks important…

Machine Learning · Computer Science 2023-02-28 Takanori Fujiwara , Yun-Hsin Kuo , Anders Ynnerman , Kwan-Liu Ma

We discuss topological aspects of cluster analysis and show that inferring the topological structure of a dataset before clustering it can considerably enhance cluster detection: theoretical arguments and empirical evidence show that…

Machine Learning · Computer Science 2022-07-04 Moritz Herrmann , Daniyal Kazempour , Fabian Scheipl , Peer Kröger

A new dimension reduction (DR) method for data sets is proposed by autonomous deforming of data manifolds. The deformation is guided by the proposed deforming vector field, which is defined by two kinds of virtual interactions between data…

Machine Learning · Computer Science 2021-10-22 Xiaodong Zhuang

Dimensionality reduction techniques are powerful tools for data preprocessing and visualization which typically come with few guarantees concerning the topological correctness of an embedding. The interleaving distance between the…

Machine Learning · Computer Science 2022-02-01 Bradley J. Nelson , Yuan Luo

While the existence of low-dimensional embedding manifolds has been shown in patterns of collective motion, the current battery of nonlinear dimensionality reduction methods are not amenable to the analysis of such manifolds. This is mainly…

Numerical Analysis · Mathematics 2017-07-21 Kelum Gajamannage , Sachit Butail , Maurizio Porfiri , Erik M. Bollt

We present Preserving Clusters and Correlations (PCC), a novel dimensionality reduction (DR) method a novel dimensionality reduction (DR) method that achieves state-of-the-art global structure (GS) preservation while maintaining competitive…

Machine Learning · Computer Science 2025-03-18 Jacob Gildenblat , Jens Pahnke

Dimension reduction (DR) is commonly utilized to capture the intrinsic structure and transform high-dimensional data into low-dimensional space while retaining meaningful properties of the original data. It is used in various applications,…

Machine Learning · Computer Science 2022-11-29 Zelin Zang , Shenghui Cheng , Linyan Lu , Hanchen Xia , Liangyu Li , Yaoting Sun , Yongjie Xu , Lei Shang , Baigui Sun , Stan Z. Li

Clustering on the data with multiple aspects, such as multi-view or multi-type relational data, has become popular in recent years due to their wide applicability. The approach using manifold learning with the Non-negative Matrix…

Machine Learning · Computer Science 2020-09-08 Khanh Luong , Richi Nayak

An analysis of high-dimensional data can offer a detailed description of a system but is often challenged by the curse of dimensionality. General dimensionality reduction techniques can alleviate such difficulty by extracting a few…

Methodology · Statistics 2021-09-28 Di Bo , Hoon Hwangbo , Vinit Sharma , Corey Arndt , Stephanie C. TerMaath

Linear dimensionality reduction methods are a cornerstone of analyzing high dimensional data, due to their simple geometric interpretations and typically attractive computational properties. These methods capture many data features of…

Machine Learning · Statistics 2016-03-22 John P. Cunningham , Zoubin Ghahramani

While clustering is one of the most popular methods for data mining, analysts lack adequate tools for quick, iterative clustering analysis, which is essential for hypothesis generation and data reasoning. We introduce Clustrophile, an…

Human-Computer Interaction · Computer Science 2017-10-09 Çağatay Demiralp

We propose a method to reconstruct and cluster incomplete high-dimensional data lying in a union of low-dimensional subspaces. Exploring the sparse representation model, we jointly estimate the missing data while imposing the intrinsic…

Computer Vision and Pattern Recognition · Computer Science 2017-09-06 João Carvalho , Manuel Marques , João P. Costeira

Manifold learning (ML), known also as non-linear dimension reduction, is a set of methods to find the low dimensional structure of data. Dimension reduction for large, high dimensional data is not merely a way to reduce the data; the new…

Machine Learning · Statistics 2023-11-08 Marina Meilă , Hanyu Zhang

To cluster, classify and represent are three fundamental objectives of learning from high-dimensional data with intrinsic structure. To this end, this paper introduces three interpretable approaches, i.e., segmentation (clustering) via the…

Computer Vision and Pattern Recognition · Computer Science 2023-06-21 Kai-Liang Lu , Avraham Chapman