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In the integrative analyses of omics data, it is often of interest to extract data representation from one data type that best reflect its relations with another data type. This task is traditionally fulfilled by linear methods such as…

Histopathology images are crucial to the study of complex diseases such as cancer. The histologic characteristics of nuclei play a key role in disease diagnosis, prognosis and analysis. In this work, we propose a sparse Convolutional…

For multiple scientific endeavors it is common to measure a phenomenon of interest in more than one ways. We make observations of objects from several different perspectives in space, at different points in time; we may also measure…

Traditional transformer-based semantic segmentation relies on quantized embeddings. However, our analysis reveals that autoencoder accuracy on segmentation mask using quantized embeddings (e.g. VQ-VAE) is 8% lower than continuous-valued…

Steered-Mixtures-of-Experts (SMoE) models provide sparse, edge-aware representations, applicable to many use-cases in image processing. This includes denoising, super-resolution and compression of 2D- and higher dimensional pixel data.…

When applying the foreground removal methods to uncover the faint cosmological signal from the epoch of reionization (EoR), the foreground spectra are assumed to be smooth. However, this assumption can be seriously violated in practice…

A recent class of hyperspectral anomaly detection methods can be trained once on background datasets and then deployed universally without per-scene retraining or parameter tuning, showing strong efficiency and robustness. Building upon…

Research in the past years introduced Steered Mixture-of-Experts (SMoE) as a framework to form sparse, edge-aware models for 2D- and higher dimensional pixel data, applicable to compression, denoising, and beyond, and capable to compete…

Several approaches have been proposed to solve the spectral unmixing problem in hyperspectral image analysis. Among them the use of sparse regression techniques aims to characterize the abundances in pixels based on a large library of…

Synthetic Aperture Radar (SAR) imagery plays a critical role in all-weather, day-and-night remote sensing applications. However, existing SAR-oriented deep learning is constrained by data scarcity, while the physically grounded speckle…

We propose a completely unsupervised pixel-wise anomaly detection method for hyperspectral images. The proposed method consists of three steps called data preparation, reconstruction, and detection. In the data preparation step, we apply a…

This paper introduces the use of single layer and deep convolutional networks for remote sensing data analysis. Direct application to multi- and hyper-spectral imagery of supervised (shallow or deep) convolutional networks is very…

The idea of using a deep autoencoder to encode seismic waveform features and then use them in different seismological applications is appealing. In this paper, we designed tests to evaluate this idea of using autoencoders as feature…

Automotive telemetry data exhibits slow drifts and fast spikes, often within the same sequence, making reliable anomaly detection challenging. Standard reconstruction-based methods, including sequence variational autoencoders (VAEs), use a…

This work presents a framework based on feature disentanglement to learn speaker embeddings that are robust to environmental variations. Our framework utilises an auto-encoder as a disentangler, dividing the input speaker embedding into…

The dissection of hyperspectral images into intrinsic components through hyperspectral intrinsic image decomposition (HIID) enhances the interpretability of hyperspectral data, providing a foundation for more accurate classification…

The goal of anomaly detection is to identify examples that deviate from normal or expected behavior. We tackle this problem for images. We consider a two-phase approach. First, using normal examples, a convolutional autoencoder (CAE) is…

We introduce an anomaly detection method for multivariate time series data with the aim of identifying critical periods and features influencing extreme climate events like snowmelt in the Arctic. This method leverages the Variational…

In fluorescence microscopy, spectral unmixing aims to recover individual fluorophore concentrations from spectral images that capture mixed fluorophore emissions. Since classical methods operate pixel-wise and rely on least-squares fitting,…

Imaging spectrometers measure electromagnetic energy scattered in their instantaneous field view in hundreds or thousands of spectral channels with higher spectral resolution than multispectral cameras. Imaging spectrometers are therefore…