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High-dimensional data of discrete and skewed nature is commonly encountered in high-throughput sequencing studies. Analyzing the network itself or the interplay between genes in this type of data continues to present many challenges. As…

Methodology · Statistics 2017-12-01 Anjali Silva , Steven J. Rothstein , Paul D. McNicholas , Sanjeena Subedi

Clustering aims to divide a set of points into groups. The current paradigm assumes that the grouping is well-defined (unique) given the probability model from which the data is drawn. Yet, recent experiments have uncovered several…

Machine Learning · Statistics 2024-06-25 Mireille Boutin , Evzenie Coupkova

Clustering analysis is one of the most widely used statistical tools in many emerging areas such as microarray data analysis. For microarray and other high-dimensional data, the presence of many noise variables may mask underlying…

Machine Learning · Statistics 2008-03-26 Benhuai Xie , Wei Pan , Xiaotong Shen

Networks often exhibit structure at disparate scales. We propose a method for identifying community structure at different scales based on multiresolution modularity and consensus clustering. Our contribution consists of two parts. First,…

Social and Information Networks · Computer Science 2018-02-01 Lucas G. S. Jeub , Olaf Sporns , Santo Fortunato

Upholding data privacy especially in medical research has become tantamount to facing difficulties in accessing individual-level patient data. Estimating mixed effects binary logistic regression models involving data from multiple data…

Methodology · Statistics 2025-10-06 Marie Analiz April Limpoco , Christel Faes , Niel Hens

Large contingency tables arise in many contexts but especially in the collection of survey and census data by government statistical agencies. Because the vast majority of the variables in this context have a large number of categories,…

Applications · Statistics 2008-11-12 L. Fraser Jackson , Alistair G. Gray , Stephen E. Fienberg

Recently, there has been significant interest in linear regression in the situation where predictors and responses are not observed in matching pairs corresponding to the same statistical unit as a consequence of separate data collection…

Methodology · Statistics 2019-10-04 Martin Slawski , Guoqing Diao , Emanuel Ben-David

In the mixture models problem it is assumed that there are $K$ distributions $\theta_{1},\ldots,\theta_{K}$ and one gets to observe a sample from a mixture of these distributions with unknown coefficients. The goal is to associate instances…

Machine Learning · Statistics 2013-12-02 Jason D Lee , Ran Gilad-Bachrach , Rich Caruana

This paper presents a new multitask learning framework that learns a shared representation among the tasks, incorporating both task and feature clusters. The jointly-induced clusters yield a shared latent subspace where task relationships…

Machine Learning · Statistics 2017-03-06 Keerthiram Murugesan , Jaime Carbonell , Yiming Yang

This paper introduces {\em fusion subspace clustering}, a novel method to learn low-dimensional structures that approximate large scale yet highly incomplete data. The main idea is to assign each datum to a subspace of its own, and minimize…

Machine Learning · Computer Science 2022-05-24 Usman Mahmood , Daniel Pimentel-Alarcón

Mixture models extend the toolbox of clustering methods available to the data analyst. They allow for an explicit definition of the cluster shapes and structure within a probabilistic framework and exploit estimation and inference…

Methodology · Statistics 2025-09-15 Bettina Grün

A wide range of Bayesian models have been proposed for data that is divided hierarchically into groups. These models aim to cluster the data at different levels of grouping, by assigning a mixture component to each datapoint, and a mixture…

Machine Learning · Computer Science 2015-04-21 Adway Mitra

The two most extended density-based approaches to clustering are surely mixture model clustering and modal clustering. In the mixture model approach, the density is represented as a mixture and clusters are associated to the different…

Machine Learning · Statistics 2016-09-16 José E. Chacón

Despite tremendous advancements in Artificial Intelligence, learning from large sets of data in an unsupervised manner remains a significant challenge. Classical clustering algorithms often fail to discover complex dependencies in large…

Machine Learning · Computer Science 2023-07-18 Adam Piróg , Halina Kwaśnicka

In medical, social, and behavioral research we often encounter datasets with a multilevel structure and multiple correlated dependent variables. These data are frequently collected from a study population that distinguishes several…

Methodology · Statistics 2023-12-18 Xynthia Kavelaars , Joris Mulder , Maurits Kaptein

Clustering methods with dimension reduction have been receiving considerable wide interest in statistics lately and a lot of methods to simultaneously perform clustering and dimension reduction have been proposed. This work presents a novel…

Methodology · Statistics 2014-06-17 Michio Yamamoto , Kenichi Hayashi

Kernel spectral clustering corresponds to a weighted kernel principal component analysis problem in a constrained optimization framework. The primal formulation leads to an eigen-decomposition of a centered Laplacian matrix at the dual…

Social and Information Networks · Computer Science 2014-12-03 Raghvendra Mall , Rocco Langone , Johan A. K. Suykens

The LIPGENE-SU.VI.MAX study, like many others, recorded high dimensional continuous phenotypic data and categorical genotypic data. LIPGENE-SU.VI.MAX focuses on the need to account for both phenotypic and genetic factors when studying the…

Biclustering is an unsupervised machine-learning approach aiming to cluster rows and columns simultaneously in a data matrix. Several biclustering algorithms have been proposed for handling numeric datasets. However, real-world data mining…

Machine Learning · Computer Science 2024-08-26 Adán José-García , Julie Jacques , Clément Chauvet , Vincent Sobanski , Clarisse Dhaenens

This paper explores the problem of clustering ensemble, which aims to combine multiple base clusterings to produce better performance than that of the individual one. The existing clustering ensemble methods generally construct a…

Machine Learning · Computer Science 2020-12-17 Yuheng Jia , Hui Liu , Junhui Hou , Qingfu Zhang
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