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The management of third-party package dependencies is crucial to most technology stacks, with package managers acting as brokers to ensure that a verified package is correctly installed, configured, or removed from an application. Diversity…

Software Engineering · Computer Science 2021-08-16 Syful Islam , Raula Gaikovina Kula , Christoph Treude , Bodin Chinthanet , Takashi Ishio , Kenichi Matsumoto

An Operating System (OS) combines multiple interdependent software packages, which usually have their own independently developed architectures. When a multitude of independent packages are placed together in an OS, an implicit…

Software Engineering · Computer Science 2023-07-11 Victor Prokhorenko , Chadni Islam , Muhammad Ali Babar

Dependabot, a popular dependency management tool, includes a compatibility score feature that helps client packages assess the risk of accepting a dependency update by leveraging knowledge from "the crowd". For each dependency update,…

Software Engineering · Computer Science 2024-03-15 Benjamin Rombaut , Filipe R. Cogo , Ahmed E. Hassan

Relying on dependency packages accelerates software development, but it also increases the exposure to security vulnerabilities that may be present in dependencies. While developers have full control over which dependency packages (and…

Software Engineering · Computer Science 2023-10-13 Abbas Javan Jafari , Diego Elias Costa , Ahmad Abdellatif , Emad Shihab

Splitting a logic program allows us to reduce the task of computing its stable models to similar tasks for its subprograms. This can be used to increase solving performance and prove program correctness. We generalize the conditions under…

Artificial Intelligence · Computer Science 2025-03-30 Jorge Fandinno , Yuliya Lierler

Statistical models serve as the cornerstone for hypothesis testing in empirical studies. This paper introduces a new cross-platform Python-based package designed to utilise different likelihood prescriptions via a flexible plug-in system.…

High Energy Physics - Phenomenology · Physics 2024-01-29 Jack Y. Araz

Although it is possible to increase confidence in Free and Open Source Software (FOSS) by reviewing its source code, trusting code is not the same as trusting its executable counterparts. These are typically built and distributed by…

Software Engineering · Computer Science 2021-04-14 Chris Lamb , Stefano Zacchiroli

Science depends on collaboration, result reproduction, and the development of supporting software tools. Each of these requires careful management of software versions. We present a unified model for installing, managing, and publishing…

Computation · Statistics 2015-01-15 Gabriel Becker , Cory Barr , Robert Gentleman , Michael Lawrence

Results of simulation studies evaluating the performance of statistical methods are often considered actionable and thus can have a major impact on the way empirical research is implemented. However, so far there is limited evidence about…

Building software-driven systems that are easily understood becomes a challenge, with their ever-increasing complexity and autonomy. Accordingly, recent research efforts strive to aid in designing explainable systems. Nevertheless, a common…

Artificial Intelligence · Computer Science 2019-02-11 Dimitri Bohlender , Maximilian A. Köhl

Developers rely on open-source packages and must review dependencies to safeguard against vulnerable or malicious upstream code. A careful review of all dependencies changes often does not occur in practice. Therefore, developers need…

Software Engineering · Computer Science 2025-07-24 Sivana Hamer , Nasif Imtiaz , Mahzabin Tamanna , Preya Shabrina , Laurie Williams

The long-standing aspiration for software reuse has made astonishing strides in the past few years. Many modern software development ecosystems now come with rich sets of publicly-available components contributed by the community.…

Software Engineering · Computer Science 2022-09-07 Patrick Lam , Jens Dietrich , David J. Pearce

Reproducibility, the ability to recompute results, and replicability, the chances other experimenters will achieve a consistent result, are two foundational characteristics of successful scientific research. Consistent findings from…

Applications · Statistics 2015-06-23 Jeffrey T. Leek , Roger D. Peng

Replication of scientific experiments is critical to the advance of science. Unfortunately, the discipline of Computer Science has never treated replication seriously, even though computers are very good at doing the same thing over and…

General Literature · Computer Science 2013-04-15 Ian P. Gent

As modern software extensively uses free open source packages as dependencies, developers have to regularly pull in new third-party code through frequent updates. However, without a proper review of every incoming change, vulnerable and…

Software Engineering · Computer Science 2022-11-08 Nasif Imtiaz , Laurie Williams

Determining whether a configurable software system has a performance bug or it was misconfigured is often challenging. While there are numerous debugging techniques that can support developers in this task, there is limited empirical…

Software Engineering · Computer Science 2022-03-22 Miguel Velez , Pooyan Jamshidi , Norbert Siegmund , Sven Apel , Christian Kästner

Reproducibility in research remains hindered by complex systems involving data, models, tools, and algorithms. Studies highlight a reproducibility crisis due to a lack of standardized reporting, code and data sharing, and rigorous…

Software Engineering · Computer Science 2024-11-05 Venkat S. Malladi , Maria Yazykova , Olesya Melnichenko , Yulia Dubinina

Requirements are informal and semi-formal descriptions of the expected behavior of a system. They are usually expressed in the form of natural language sentences and checked for errors manually, e.g., by peer reviews. Manual checks are…

Logic in Computer Science · Computer Science 2018-04-30 Simone Vuotto

Manually ensuring that the implementation of a software system is consistent with the software architecture is a laborious and error-prone task. Thus, a variety of approaches towards automated consistency checking have been developed to…

Software Engineering · Computer Science 2015-10-30 Timo Greifenberg , Klaus Müller , Bernhard Rumpe

Software patching is a common method of removing vulnerabilities in software components to make IT systems more secure. However, there are many cases where software patching is not possible due to the critical nature of the application,…

Cryptography and Security · Computer Science 2021-06-03 Stjepan Groš , Ivan Kovačević , Ivan Dujmić , Matej Petrinović