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Related papers: Pathway Realisability in Chemical Networks

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We discuss the ``soft-ratcheting'' algorithm which generates targeted stochastic trajectories in molecular systems with scores corresponding to their probabilities. The procedure, which requires no initial pathway guess, is capable of…

Chemical Physics · Physics 2007-05-23 Daniel M. Zuckerman , Thomas B. Woolf

Markov decision processes model systems subject to nondeterministic and probabilistic uncertainty. A plethora of verification techniques addresses variations of reachability properties, such as: Is there a scheduler resolving the…

Logic in Computer Science · Computer Science 2025-05-26 Lina Gerlach , Tobias Winkler , Erika Ábrahám , Borzoo Bonakdarpour , Sebastian Junges

Path planning in obstacle-dense environments is a key challenge in robotics, and depends on inferring scene attributes and associated uncertainties. We present a multiple-hypothesis path planner designed to navigate complex environments…

Robotics · Computer Science 2023-08-16 Brian H. Wang , Beatriz Asfora , Rachel Zheng , Aaron Peng , Jacopo Banfi , Mark Campbell

Among the several topological properties of complex networks, the shortest path represents a particularly important characteristic because of its potential impact not only on other topological properties, but mainly for its influence on…

Social and Information Networks · Computer Science 2020-03-30 Guilherme S. Domingues , Cesar H. Comin , Luciano da F. Costa

Graph neural networks (GNNs) are powerful graph-based deep-learning models that have gained significant attention and demonstrated remarkable performance in various domains, including natural language processing, drug discovery, and…

Machine Learning · Computer Science 2023-06-06 Jaykumar Kakkad , Jaspal Jannu , Kartik Sharma , Charu Aggarwal , Sourav Medya

Global protocol specifications are the starting point of top-down verification methodologies, and serve as a blueprint for synthesizing local specifications that guarantee the correctness of distributed implementations. In this work, we…

Formal Languages and Automata Theory · Computer Science 2026-02-11 Elaine Li , Felix Stutz

We aim at characterizing viability, invariance and some reachability properties of controlled piecewise deterministic Markov processes (PDMPs). Using analytical methods from the theory of viscosity solutions, we establish criteria for…

Optimization and Control · Mathematics 2013-04-09 D. Goreac

We study a scenario for route planning in road networks, where the objective to be optimized may change between every shortest path query. Since this invalidates many of the known speedup techniques for road networks that are based on…

Data Structures and Algorithms · Computer Science 2015-09-11 Julian Dibbelt , Ben Strasser , Dorothea Wagner

Path integrals represent a powerful route to quantization: they calculate probabilities by summing over classical configurations of variables such as fields, assigning each configuration a phase equal to the action of that configuration.…

Quantum Physics · Physics 2013-02-13 Seth Lloyd , Olaf Dreyer

Recent research in decision theoretic planning has focussed on making the solution of Markov decision processes (MDPs) more feasible. We develop a family of algorithms for structured reachability analysis of MDPs that are suitable when an…

Artificial Intelligence · Computer Science 2013-04-24 Craig Boutilier , Ronen I. Brafman , Christopher W. Geib

Routing information through networks is a universal phenomenon in both natural and manmade complex systems. When each node has full knowledge of the global network connectivity, finding short communication paths is merely a matter of…

Physics and Society · Physics 2009-05-20 Marian Boguna , Dmitri Krioukov , kc claffy

Trajectory representation learning on a network enhances our understanding of vehicular traffic patterns and benefits numerous downstream applications. Existing approaches using classic machine learning or deep learning embed trajectories…

Machine Learning · Computer Science 2023-12-14 Yuanbo Tang , Zhiyuan Peng , Yang Li

Identifying threats in a network traffic flow which is encrypted is uniquely challenging. On one hand it is extremely difficult to simply decrypt the traffic due to modern encryption algorithms. On the other hand, passing such an encrypted…

Cryptography and Security · Computer Science 2020-11-10 Syed Muhammad Kumail Raza , Juan Caballero

Path integrals are a ubiquitous tool in theoretical physics. However, their use is sometimes hindered by the lack of control on various manipulations -- such as performing a change of the integration path -- one would like to carry out in…

Statistical Mechanics · Physics 2023-04-21 Thibaut Arnoulx de Pirey , Leticia F. Cugliandolo , Vivien Lecomte , Frédéric van Wijland

Mapping the chemical reaction pathways and their corresponding activation barriers is a significant challenge in molecular simulation. Given the inherent complexities of 3D atomic geometries, even generating an initial guess of these paths…

Computational Physics · Physics 2025-01-24 Akihide Hayashi , So Takamoto , Ju Li , Yuta Tsuboi , Daisuke Okanohara

Real-world networks are neither regular nor random, a fact elegantly explained by mechanisms such as the Watts-Strogatz or the Barabasi-Albert models, among others. Both mechanisms naturally create shortcuts and hubs, which while enhancing…

Physics and Society · Physics 2023-07-03 Ernesto Estrada , Jesús Gómez-Gardeñes , Lucas Lacasa

Acquiring plausible pathways on high-dimensional structural distributions is beneficial in several domains. For example, in the drug discovery field, a protein conformational pathway, i.e. a highly probable sequence of protein structural…

Quantitative Methods · Quantitative Biology 2025-06-04 Ziyad Oulhaj , Yoshiyuki Ishii , Kento Ohga , Kimihiro Yamazaki , Mutsuyo Wada , Yuhei Umeda , Takashi Kato , Yuichiro Wada , Hiroaki Kurihara

Real-world networks are often complex and large with millions of nodes, posing a great challenge for analysts to quickly see the big picture for more productive subsequent analysis. We aim at facilitating exploration of node-attributed…

Social and Information Networks · Computer Science 2015-12-21 Jia Wang , Kevin Chen-Chuan Chang , Hari Sundaram

Existing quantum routing implicitly mimics classical routing principles, with finding the ``best'' path (aka pathfinding), according to a selected routing metric, as a core mechanism for establishing end-to-end entanglement. However,…

Quantum Physics · Physics 2026-01-30 Si-Yi Chen , Angela Sara Cacciapuoti , Marcello Caleffi

One of the most fundamental problems in computer science is the reachability problem: Given a directed graph and two vertices s and t, can s reach t via a path? We revisit existing techniques and combine them with new approaches to support…

Data Structures and Algorithms · Computer Science 2021-02-02 Kathrin Hanauer , Christian Schulz , Jonathan Trummer
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