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Related papers: Scribble-based 3D Multiple Abdominal Organ Segment…

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Many recent medical segmentation systems rely on powerful deep learning models to solve highly specific tasks. To maximize performance, it is standard practice to evaluate numerous pipelines with varying model topologies, optimization…

Machine Learning · Computer Science 2019-11-06 Mathias Perslev , Erik Bjørnager Dam , Akshay Pai , Christian Igel

Minimally invasive surgery is a surgical intervention used to examine the organs inside the abdomen and has been widely used due to its effectiveness over open surgery. Due to the hardware improvements such as high definition cameras, this…

Image and Video Processing · Electrical Eng. & Systems 2021-08-04 Debesh Jha , Sharib Ali , Nikhil Kumar Tomar , Michael A. Riegler , Dag Johansen , Håvard D. Johansen , Pål Halvorsen

3D medical image segmentation is a challenging task with crucial implications for disease diagnosis and treatment planning. Recent advances in deep learning have significantly enhanced fully supervised medical image segmentation. However,…

Image and Video Processing · Electrical Eng. & Systems 2025-06-23 Runmin Jiang , Zhaoxin Fan , Junhao Wu , Lenghan Zhu , Xin Huang , Tianyang Wang , Heng Huang , Min Xu

Medical image segmentation typically necessitates a large and precisely annotated dataset. However, obtaining pixel-wise annotation is a labor-intensive task that requires significant effort from domain experts, making it challenging to…

Computer Vision and Pattern Recognition · Computer Science 2023-08-01 Heng Cai , Lei Qi , Qian Yu , Yinghuan Shi , Yang Gao

Recently, weakly-supervised image segmentation using weak annotations like scribbles has gained great attention in computer vision and medical image analysis, since such annotations are much easier to obtain compared to time-consuming and…

Computer Vision and Pattern Recognition · Computer Science 2023-10-13 Qiuhui Chen , Haiying Lyu , Xinyue Hu , Yong Lu , Yi Hong

Medical image segmentation plays a critical role in clinical decision-making, treatment planning, and disease monitoring. However, accurate segmentation of medical images is challenging due to several factors, such as the lack of…

Computer Vision and Pattern Recognition · Computer Science 2023-08-01 Zihan Li , Yuan Zheng , Xiangde Luo , Dandan Shan , Qingqi Hong

2D single-slice abdominal computed tomography (CT) enables the assessment of body habitus and organ health with low radiation exposure. However, single-slice data necessitates the use of 2D networks for segmentation, but these networks…

U-Net has been widely used for segmenting abdominal organs, achieving promising performance. However, when it is used for multi-organ segmentation, first, it may be limited in exploiting global long-range contextual information due to the…

Image and Video Processing · Electrical Eng. & Systems 2024-11-05 Jin Yang , Daniel S. Marcus , Aristeidis Sotiras

Scribble-supervised medical image segmentation tackles the limitation of sparse masks. Conventional approaches alternate between: labeling pseudo-masks and optimizing network parameters. However, such iterative two-stage paradigm is…

Computer Vision and Pattern Recognition · Computer Science 2023-10-02 Zefan Yang , Di Lin , Dong Ni , Yi Wang

Recent advances in 3D fully convolutional networks (FCN) have made it feasible to produce dense voxel-wise predictions of volumetric images. In this work, we show that a multi-class 3D FCN trained on manually labeled CT scans of several…

Computer Vision and Pattern Recognition · Computer Science 2018-04-13 Holger R. Roth , Hirohisa Oda , Xiangrong Zhou , Natsuki Shimizu , Ying Yang , Yuichiro Hayashi , Masahiro Oda , Michitaka Fujiwara , Kazunari Misawa , Kensaku Mori

Automatic organ segmentation is an important yet challenging problem for medical image analysis. The pancreas is an abdominal organ with very high anatomical variability. This inhibits previous segmentation methods from achieving high…

Computer Vision and Pattern Recognition · Computer Science 2015-06-23 Holger R. Roth , Le Lu , Amal Farag , Hoo-Chang Shin , Jiamin Liu , Evrim Turkbey , Ronald M. Summers

Semi-supervised learning has attracted much attention in medical image segmentation due to challenges in acquiring pixel-wise image annotations, which is a crucial step for building high-performance deep learning methods. Most existing…

Computer Vision and Pattern Recognition · Computer Science 2020-10-22 Shuailin Li , Chuyu Zhang , Xuming He

Background and objective: Medical image segmentation is a core task in various clinical applications. However, acquiring large-scale, fully annotated medical image datasets is both time-consuming and costly. Scribble annotations, as a form…

Computer Vision and Pattern Recognition · Computer Science 2025-07-04 Peilin Zhang , Shaouxan Wua , Jun Feng , Zhuo Jin , Zhizezhang Gao , Jingkun Chen , Yaqiong Xing , Xiao Zhang

Scribble-based weakly supervised semantic segmentation leverages only a few annotated pixels as labels to train a segmentation model, presenting significant potential for reducing the human labor involved in the annotation process. This…

Computer Vision and Pattern Recognition · Computer Science 2025-03-19 Xinliang Zhang , Lei Zhu , Shuang Zeng , Hangzhou He , Ourui Fu , Zhengjian Yao , Zhaoheng Xie , Yanye Lu

Automated abdominal multi-organ segmentation is a crucial yet challenging task in the computer-aided diagnosis of abdominal organ-related diseases. Although numerous deep learning models have achieved remarkable success in many medical…

Image and Video Processing · Electrical Eng. & Systems 2022-12-26 Shishuai Hu , Zehui Liao , Yong Xia

Scribble supervision has emerged as a promising approach for reducing annotation costs in medical 3D segmentation by leveraging sparse annotations instead of voxel-wise labels. While existing methods report strong performance, a closer…

Computer Vision and Pattern Recognition · Computer Science 2025-08-14 Karol Gotkowski , Klaus H. Maier-Hein , Fabian Isensee

The contextual information, presented in abdominal CT scan, is relative consistent. In order to make full use of the overall 3D context, we develop a whole-volume-based coarse-to-fine framework for efficient and effective abdominal…

Image and Video Processing · Electrical Eng. & Systems 2021-11-01 Fan Zhang , Yu Wang , Hua Yang

In this work, we propose to resolve the issue existing in current deep learning based organ segmentation systems that they often produce results that do not capture the overall shape of the target organ and often lack smoothness. Since…

Computer Vision and Pattern Recognition · Computer Science 2019-12-10 Yuan Xue , Hui Tang , Zhi Qiao , Guanzhong Gong , Yong Yin , Zhen Qian , Chao Huang , Wei Fan , Xiaolei Huang

Semi-supervised 3D medical image segmentation aims to achieve accurate segmentation using few labelled data and numerous unlabelled data. The main challenge in the design of semi-supervised learning methods consists in the effective use of…

Computer Vision and Pattern Recognition · Computer Science 2025-02-18 Yanyan Wang , Kechen Song , Yuyuan Liu , Shuai Ma , Yunhui Yan , Gustavo Carneiro

Recent trends in semi-supervised learning have significantly boosted the performance of 3D semi-supervised medical image segmentation. Compared with 2D images, 3D medical volumes involve information from different directions, e.g.,…

Computer Vision and Pattern Recognition · Computer Science 2023-03-24 Heng Cai , Shumeng Li , Lei Qi , Qian Yu , Yinghuan Shi , Yang Gao