Related papers: Estimating mutual information for spike trains: a …
Assessing the presence and abundance of birds is important for monitoring specific species as well as overall ecosystem health. Many birds are most readily detected by their sounds, and thus passive acoustic monitoring is highly…
Sensory systems take continuously varying stimuli as their input and encode features relevant for the organism's survival into a sequence of action potentials - spike trains. The full dynamic range of complex dynamical inputs has to be…
We construct a model that predicts the statistical properties of spike trains generated by a sensory neuron. The model describes the combined effects of the neuron's intrinsic properties, the noise in the surrounding, and the external…
We address the problem of identifying functional interactions among stochastic neurons with variable-length memory from their spiking activity. The neuronal network is modeled by a stochastic system of interacting point processes with…
This dissertation proposes the study of multimodal learning in the context of musical signals. Throughout, we focus on the interaction between audio signals and text information. Among the many text sources related to music that can be used…
We investigate the role of the noise in the mating behavior between individuals of Nezara viridula (L.), by analyzing the temporal and spectral features of the non-pulsed type female calling song emitted by single individuals. We have…
Consider a flock of birds that fly interacting between them. The interactions are modelled through a hierarchical system in which each bird, at each time step, adjusts its own velocity according to his past velocity and a weighted mean of…
It is argued based on the results of both numerical modelling and the experiments performed on an artificial substitute of a meadow that the sound emitted by animals living in a dense surrounding such as a meadow or shrubs can be used as a…
In many animal sensory pathways, the transformation from external stimuli to spike trains is essentially deterministic. In this context, a new mathematical framework for coding and reconstruction, based on a biologically plausible model of…
The problem of deciphering how low-level patterns (action potentials in the brain, amino acids in a protein, etc.) drive high-level biological features (sensorimotor behavior, enzymatic function) represents the central challenge of…
At the single-neuron level, precisely timed spikes can either constitute firing-rate codes or spike-pattern codes that utilize the relative timing between consecutive spikes. There has been little experimental support for the hypothesis…
Complex sequencing rules observed in birdsongs provide an opportunity to investigate the neural mechanism for generating complex sequential behaviors. To relate the findings from studying birdsongs to other sequential behaviors, it is…
While traditional feed-forward filter models can reproduce the rate responses of retinal ganglion neurons to simple stimuli, they cannot explain why synchrony between spikes is much higher than expected by Poisson firing [6], and can be…
In this paper, we propose a method of utilizing aligned lyrics as additional information to improve the performance of singing voice separation. We have combined the highway network-based lyrics encoder into Open-unmix separation network…
We study some of the most commonly used mutual information estimators, based on histograms of fixed or adaptive bin size, $k$-nearest neighbors and kernels, and focus on optimal selection of their free parameters. We examine the consistency…
Identifying sequences of syllables within birdsongs is key to tackling a wide array of challenges, including bird individual identification and better understanding of animal communication and sensory-motor learning. Recently, machine…
In many species of songbirds, juvenile males learn their songs from adult male tutors. In this paper we formulate a novel Markov model for birdsong transmission developed by analogy with models used in biological sequence analysis. We fit…
We address the problem of classifying bird species using their song recordings, a challenging task due to environmental noise, overlapping vocalizations, and missing labels. Existing models struggle with low-SNR or multi-species recordings.…
Recent advancements in miniaturized fluorescence microscopy have made it possible to investigate neuronal responses to external stimuli in awake behaving animals through the analysis of intra-cellular calcium signals. An on-going challenge…
Segregating an audio mixture containing multiple simultaneous bird sounds is a challenging task. However, birdsong often contains rapid pitch modulations, and these modulations carry information which may be of use in automatic recognition.…