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Related papers: MuLaN: a MultiLayer Networks Alignment Algorithm

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Network alignment (NA) aims to find a node mapping between molecular networks of different species that identifies topologically or functionally similar network regions. Analogous to genomic sequence alignment, NA can be used to transfer…

Molecular Networks · Quantitative Biology 2016-04-07 Vipin Vijayan , Tijana Milenkovic

Relational information between different types of entities is often modelled by a multilayer network (MLN) -- a network with subnetworks represented by layers. The layers of an MLN can be arranged in different ways in a visual…

Deep neural networks (DNNs) typically employ an end-to-end (E2E) training paradigm which presents several challenges, including high GPU memory consumption, inefficiency, and difficulties in model parallelization during training. Recent…

Computer Vision and Pattern Recognition · Computer Science 2024-12-23 Yuming Zhang , Shouxin Zhang , Peizhe Wang , Feiyu Zhu , Dongzhi Guan , Junhao Su , Jiabin Liu , Changpeng Cai

Existing text-to-image models still struggle to generate images of multiple objects, especially in handling their spatial positions, relative sizes, overlapping, and attribute bindings. To efficiently address these challenges, we develop a…

Computer Vision and Pattern Recognition · Computer Science 2024-05-27 Sen Li , Ruochen Wang , Cho-Jui Hsieh , Minhao Cheng , Tianyi Zhou

Neural networks encode inputs as high-dimensional vectors, known as representations, that capture how models process data by encoding task-relevant structure and semantics. Representation alignment refers to the degree to which different…

Computational Geometry · Computer Science 2026-05-26 Xinyuan Yan , Rita Sevastjanova , Mennatallah El-Assady , Bei Wang

Biological network alignment (NA) aims to identify similar regions between molecular networks of different species. NA can be local or global. Just as the recent trend in the NA field, we also focus on global NA, which can be pairwise (PNA)…

Molecular Networks · Quantitative Biology 2020-04-28 Vipin Vijayan , Shawn Gu , Eric Krebs , Lei Meng , Tijana Milenkovic

The paper introduces a number of structural and functional features of classification of multilayer networks (MLN), by means of which distinguish monoflow partially overlapped MLN, that are quite common in the study of intersystem…

Physics and Society · Physics 2021-11-23 Olexandr Polishchuk

Recent progresses in domain adaptive semantic segmentation demonstrate the effectiveness of adversarial learning (AL) in unsupervised domain adaptation. However, most adversarial learning based methods align source and target distributions…

Computer Vision and Pattern Recognition · Computer Science 2022-06-07 Jiaxing Huang , Dayan Guan , Shijian Lu , Aoran Xiao

Analogous to genomic sequence alignment, biological network alignment (NA) aims to find regions of similarities between molecular networks (rather than sequences) of different species. NA can be either local (LNA) or global (GNA). LNA aims…

Molecular Networks · Quantitative Biology 2016-06-07 Lei Meng , Joseph Crawford , Aaron Striegel , Tijana Milenkovic

Biological network alignment aims to identify similar regions between networks of different species. Existing methods compute node "similarities" to rapidly identify from possible alignments the "high-scoring" alignments with respect to the…

Molecular Networks · Quantitative Biology 2013-11-12 Vikram Saraph , Tijana Milenković

Network alignment (NA) aims to find regions of similarities between molecular networks of different species. There exist two NA categories: local (LNA) or global (GNA). LNA finds small highly conserved network regions and produces a…

Molecular Networks · Quantitative Biology 2015-09-30 Lei Meng , Aaron Striegel , Tijana Milenkovic

Structural heterogeneity between knowledge graphs is an outstanding challenge for entity alignment. This paper presents Neighborhood Matching Network (NMN), a novel entity alignment framework for tackling the structural heterogeneity…

Computation and Language · Computer Science 2020-05-13 Yuting Wu , Xiao Liu , Yansong Feng , Zheng Wang , Dongyan Zhao

Our Microbiome Network Alignment Algorithm (MiNAA) aligns two microbial networks using a combination of the GRAph ALigner (GRAAL) algorithm and the Hungarian algorithm. Network alignment algorithms find pairs of nodes (one node from the…

Molecular Networks · Quantitative Biology 2022-12-13 Reed Nelson , Rosa Aghdam , Claudia Solis-Lemus

Feed-forward, fully-connected Artificial Neural Networks (ANNs) or the so-called Multi-Layer Perceptrons (MLPs) are well-known universal approximators. However, their learning performance varies significantly depending on the function or…

Computer Vision and Pattern Recognition · Computer Science 2019-10-21 Serkan Kiranyaz , Turker Ince , Alexandros Iosifidis , Moncef Gabbouj

Online users are typically active on multiple social media networks (SMNs), which constitute a multiplex social network. It is becoming increasingly challenging to determine whether given accounts on different SMNs belong to the same user;…

Physics and Society · Physics 2021-11-10 Rui Tang , Zhenxiong Miao , Shuyu Jiang , Xingshu Chen , Haizhou Wang , Wei Wang

Networks are a powerful tool to model complex systems, and the definition of many Graph Neural Networks (GNN), Deep Learning algorithms that can handle networks, has opened a new way to approach many real-world problems that would be hardly…

Machine Learning · Computer Science 2021-09-28 Marco Grassia , Manlio De Domenico , Giuseppe Mangioni

Network (or Graph) Alignment Algorithms aims to reveal structural similarities among graphs. In particular Local Network Alignment Algorithms (LNAs) finds local regions of similarity among two or more networks. Such algorithms are in…

Social and Information Networks · Computer Science 2020-08-12 Pietro Hiram Guzzi

Predicting multiple real-world tasks in a single model often requires a particularly diverse feature space. Multimodal (MM) models aim to extract the synergistic predictive potential of multiple data types to create a shared feature space…

Machine Learning · Computer Science 2023-11-07 Vinitra Swamy , Malika Satayeva , Jibril Frej , Thierry Bossy , Thijs Vogels , Martin Jaggi , Tanja Käser , Mary-Anne Hartley

The information processing abilities of a multilayer neural network with a number of hidden units scaling as the input dimension are studied using statistical mechanics methods. The mapping from the input layer to the hidden units is…

Statistical Mechanics · Physics 2009-11-07 Michal Rosen-Zvi , Andreas Engel , Ido Kanter

Multi-domain learning (MDL) aims at obtaining a model with minimal average risk across multiple domains. Our empirical motivation is automated microscopy data, where cultured cells are imaged after being exposed to known and unknown…

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