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Developing an efficient code for large, multiscale astrophysical simulations is crucial in preparing the upcoming era of exascale computing. RAMSES is an astrophysical simulation code that employs parallel processing based on the Message…

Instrumentation and Methods for Astrophysics · Physics 2024-11-25 San Han , Yohan Dubois , Jaehyun Lee , Juhan Kim , Corentin Cadiou , Sukyoung K. Yi

MPI derived datatypes are an abstraction that simplifies handling of non-contiguous data in MPI applications. These datatypes are recursively constructed at runtime from primitive Named Types defined in the MPI standard. More recently, the…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-04-22 Carl Pearson , Kun Wu , I-Hsin Chung , Jinjun Xiong , Wen-Mei Hwu

This paper presents performance results comparing MPI-based implementations of the popular Conjugate Gradient (CG) method and several of its communication hiding (or 'pipelined') variants. Pipelined CG methods are designed to efficiently…

Distributed, Parallel, and Cluster Computing · Computer Science 2019-05-17 Siegfried Cools , Jeffrey Cornelis , Pieter Ghysels , Wim Vanroose

A new parallel algorithm utilizing partitioned global address space (PGAS) programming model to achieve high scalability is reported for particle tracking in direct numerical simulations of turbulent flow. The work is motivated by the…

Computational Physics · Physics 2020-05-28 Dhawal Buaria , P. K. Yeung

We present the parallel particle filtering (PPF) software library, which enables hybrid shared-memory/distributed-memory parallelization of particle filtering (PF) algorithms combining the Message Passing Interface (MPI) with multithreading…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-04-07 Ömer Demirel , Ihor Smal , Wiro Niessen , Erik Meijering , Ivo F. Sbalzarini

Hybrid MPI+threads programming is gaining prominence as an alternative to the traditional "MPI everywhere'" model to better handle the disproportionate increase in the number of cores compared with other on-node resources. Current…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-02-10 Rohit Zambre , Aparna Chandramowlishwaran , Pavan Balaji

Bayesian Networks (BNs) are used in various fields for modeling, prediction, and decision making. pgmpy is a python package that provides a collection of algorithms and tools to work with BNs and related models. It implements algorithms for…

Machine Learning · Computer Science 2023-04-19 Ankur Ankan , Johannes Textor

Applications are increasingly written as dynamic workflows underpinned by an execution framework that manages asynchronous computations across distributed hardware. However, execution frameworks typically offer one-size-fits-all solutions…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-10-18 J. Gregory Pauloski , Klaudiusz Rydzy , Valerie Hayot-Sasson , Ian Foster , Kyle Chard

Hardware generation languages (HGLs) increase hardware design productivity by creating parameterized modules and test benches. Unfortunately, existing tools are not widely adopted due to several demerits, including limited support for…

Hardware Architecture · Computer Science 2023-09-12 Jintao Sun , Zeke Wang , Tao Lu , Wenzhi Chen

High-level scripting languages are in many ways polar opposites to GPUs. GPUs are highly parallel, subject to hardware subtleties, and designed for maximum throughput, and they offer a tremendous advance in the performance achievable for a…

Software Engineering · Computer Science 2013-04-23 Andreas Klöckner , Nicolas Pinto , Bryan Catanzaro , Yunsup Lee , Paul Ivanov , Ahmed Fasih

This paper presents the design, implementation, and evaluation of the PyTorch distributed data parallel module. PyTorch is a widely-adopted scientific computing package used in deep learning research and applications. Recent advances in…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-06-30 Shen Li , Yanli Zhao , Rohan Varma , Omkar Salpekar , Pieter Noordhuis , Teng Li , Adam Paszke , Jeff Smith , Brian Vaughan , Pritam Damania , Soumith Chintala

The use of hybrid scheme combining the message passing programming models for inter-node parallelism and the shared memory programming models for node-level parallelism is widely spread. Existing extensive practices on hybrid Message…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-07-23 Huan Zhou , Jose Gracia , Naweiluo Zhou , Ralf Schneider

The aim of parallel computing is to increase an application performance by executing the application on multiple processors. OpenMP is an API that supports multi platform shared memory programming model and shared-memory programs are…

Distributed, Parallel, and Cluster Computing · Computer Science 2013-11-12 Vibha Rajput , Alok Katiyar

Python has become a standard scientific computing language with fast-growing support of machine learning and data analysis modules, as well as an increasing usage of big data. The Dynamic Distributed Dimensional Data Model (D4M) offers a…

The Message Passing Interface (MPI) is widely used in parallel, high-performance programming, yet writing bug-free software that uses MPI remains difficult. We introduce DafnyMPI, a novel, scalable approach to formally verifying MPI…

Programming Languages · Computer Science 2025-12-23 Aleksandr Fedchin , Antero Mejr , Hari Sundar , Jeffrey S. Foster

The solutions of a system of polynomials in several variables are often needed, e.g.: in the design of mechanical systems, and in phase-space analyses of nonlinear biological dynamics. Reliable, accurate, and comprehensive numerical…

Mathematical Software · Computer Science 2019-07-02 Jasmine Otto , Angus Forbes , Jan Verschelde

The introduction of large language models and other influential developments in AI-based language processing have led to an evolution in the methods available to quantitatively analyse language data. With the resultant growth of attention…

In typical embedded applications, the precise execution time of the program does not matter, and it is sufficient to meet a real-time deadline. However, modern applications in information security have become much more time-sensitive, due…

Cryptography and Security · Computer Science 2020-05-07 Pantea Kiaei , Patrick Schaumont

We describe our experiences in using SPIN to verify parts of the Multi Purpose Daemon (MPD) parallel process management system. MPD is a distributed collection of processes connected by Unix network sockets. MPD is dynamic: processes and…

Logic in Computer Science · Computer Science 2007-05-23 O. S. Matlin , E. Lusk , W. McCune

Dynamically typed languages such as Python have become very popular. Among other strengths, Python's dynamic nature and its straightforward linking to native code have made it the de-facto language for many research areas such as Artificial…

Programming Languages · Computer Science 2023-01-13 Wenting Zhao , Ibrahim Abdelaziz , Julian Dolby , Kavitha Srinivas , Mossad Helali , Essam Mansour