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Functional MRI (fMRI) has become the most common method for investigating the human brain. However, fMRI data present some complications for statistical analysis and modeling. One recently developed approach to these data focuses on…

Applications · Statistics 2015-03-19 Vincent Q. Vu , Pradeep Ravikumar , Thomas Naselaris , Kendrick N. Kay , Jack L. Gallant , Bin Yu

Previous brain decoding research primarily involves single-subject studies, reconstructing stimuli via fMRI activity from the same subject. Our study aims to introduce a generalization technique for cross-subject brain decoding, facilitated…

Neurons and Cognition · Quantitative Biology 2023-09-06 Matteo Ferrante , Tommaso Boccato , Nicola Toschi

A Brain Computer Interface (BCI) connects the human brain to the outside world, providing a direct communication channel. Electroencephalography (EEG) signals are commonly used in BCIs to reflect cognitive patterns related to motor function…

Machine Learning · Computer Science 2025-11-19 Abdullah Al Shiam , Md. Khademul Islam Molla , Abu Saleh Musa Miah , Md. Abdus Samad Kamal

Addressing the question of visualising human mind could help us to find regions that are associated with observed cognition and responsible for expressing the elusive mental image, leading to a better understanding of cognitive function.…

Neurons and Cognition · Quantitative Biology 2021-02-11 Pan Wang , Rui Zhou , Shuo Wang , Ling Li , Wenjia Bai , Jialu Fan , Chunlin Li , Peter Childs , Yike Guo

Deep-learning models have enabled performance leaps in analysis of high-dimensional functional MRI (fMRI) data. Yet, many previous methods are suboptimally sensitive for contextual representations across diverse time scales. Here, we…

Signal Processing · Electrical Eng. & Systems 2023-02-21 Hasan Atakan Bedel , Irmak Şıvgın , Onat Dalmaz , Salman Ul Hassan Dar , Tolga Çukur

Functional Magnetic Resonance Imaging (fMRI) is predominantly harnessed for spatially mapping activation foci along distributed pathways. However, resolving dynamic information on activation sequence remains elusive. Here, we show an…

Medical Physics · Physics 2020-02-04 Rita Gil , Francisca F. Fernandes , Noam Shemesh

Resting state functional magnetic resonance images (fMRI) are commonly used for classification of patients as having Alzheimer's disease (AD), mild cognitive impairment (MCI), or being cognitive normal (CN). Most methods use time-series…

Image and Video Processing · Electrical Eng. & Systems 2021-04-22 Nazanin Beheshti , Lennart Johnsson

Decoding brain functional states underlying different cognitive processes using multivariate pattern recognition techniques has attracted increasing interests in brain imaging studies. Promising performance has been achieved using brain…

Computer Vision and Pattern Recognition · Computer Science 2018-09-18 Hongming Li , Yong Fan

Understanding how large-scale brain networks represent visual categories is fundamental to linking perception and cortical organization. Using high-resolution 7T fMRI from the Natural Scenes Dataset, we construct parcel-level functional…

Computer Vision and Pattern Recognition · Computer Science 2026-04-01 Shira Karmi , Galia Avidan , Tammy Riklin Raviv

Recently, visual encoding based on functional magnetic resonance imaging (fMRI) have realized many achievements with the rapid development of deep network computation. Visual encoding model is aimed at predicting brain activity in response…

Neurons and Cognition · Quantitative Biology 2019-07-30 Kai Qiao , Chi Zhang , Jian Chen , Linyuan Wang , Li Tong , Bin Yan

Purpose: Visualization of subcortical gray matter is essential in neuroscience and clinical practice, particularly for disease understanding and surgical planning.While multi-inversion time (multi-TI) T$_1$-weighted (T$_1$-w) magnetic…

Image and Video Processing · Electrical Eng. & Systems 2025-12-09 Savannah P. Hays , Lianrui Zuo , Anqi Feng , Yihao Liu , Blake E. Dewey , Jiachen Zhuo , Ellen M. Mowry , Scott D. Newsome , Jerry L. Prince , Aaron Carass

Functional magnetic resonance imaging (fMRI) data provides information concerning activity in the brain and in particular the interactions between brain regions. Resting state fMRI data is widely used for inferring connectivities in the…

Applications · Statistics 2019-03-04 Christina Stoehr , John A D Aston , Claudia Kirch

Magnetic Resonance Imaging (MRI) provides detailed structural information, while functional MRI (fMRI) captures temporal brain activity. In this work, we present a multimodal deep learning framework that integrates MRI and fMRI for…

Computer Vision and Pattern Recognition · Computer Science 2026-03-17 Anima Kujur , Zahra Monfared

Modern imaging techniques for probing brain function, including functional Magnetic Resonance Imaging, intrinsic and extrinsic contrast optical imaging, and magnetoencephalography, generate large data sets with complex content. In this…

Neurons and Cognition · Quantitative Biology 2009-11-10 P. P. Mitra , B. Pesaran

Convolutional neural network (CNN) driven by image recognition has been shown to be able to explain cortical responses to static pictures at ventral-stream areas. Here, we further showed that such CNN could reliably predict and decode…

Neurons and Cognition · Quantitative Biology 2017-11-15 Haiguang Wen , Junxing Shi , Yizhen Zhang , Kun-Han Lu , Jiayue Cao , Zhongming Liu

Task functional magnetic resonance imaging (fMRI) is a type of neuroimaging data used to identify areas of the brain that activate during specific tasks or stimuli. These data are conventionally modeled using a massive univariate approach…

Methodology · Statistics 2022-11-04 Daniel A. Spencer , David Bolin , Amanda F. Mejia

In MRI-based mental disorder diagnosis, most previous studies focus on functional connectivity network (FCN) derived from functional MRI (fMRI). However, the small size of annotated fMRI datasets restricts its wide application. Meanwhile,…

Computer Vision and Pattern Recognition · Computer Science 2025-03-07 Xingcan Hu , Wei Wang , Li Xiao

Functional magnetic resonance imaging (fMRI) is widely used for studying and diagnosing brain disorders, with functional connectivity (FC) matrices providing powerful representations of large-scale neural interactions. However, existing…

Tissues and Organs · Quantitative Biology 2026-04-17 Qianyu Chen , Shujian Yu

In this work, we delve into the EEG classification task in the domain of visual brain decoding via two frameworks, involving two different learning paradigms. Considering the spatio-temporal nature of EEG data, one of our frameworks is…

Human-Computer Interaction · Computer Science 2024-08-12 Akanksha Sharma , Jyoti Nigam , Abhishek Rathore , Arnav Bhavsar

Functional Magnetic Resonance Imaging (fMRI) is an imaging technique widely used to study human brain activity. fMRI signals in areas across the brain transiently synchronise and desynchronise their activity in a highly structured manner,…

Machine Learning · Computer Science 2025-08-12 Yiran Huang , Amirhossein Nouranizadeh , Christine Ahrends , Mengjia Xu