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Motivated by recent simulations and by experiments on aggregation of gliding bacteria, we study a model of the collective dynamics of self-propelled hard rods on a substrate in two dimensions. The rods have finite size, interact via…

Soft Condensed Matter · Physics 2009-11-13 Aparna Baskaran , M. Cristina Marchetti

A wide range of experimental systems including gliding, swarming and swimming bacteria, in-vitro motility assays as well as shaken granular media are commonly described as self-propelled rods. Large ensembles of those entities display a…

Statistical Mechanics · Physics 2021-01-18 Markus Bär , Robert Großmann , Sebastian Heidenreich , Fernando Peruani

Recent experiments on active materials, such as dense bacterial suspensions and microtubule-kinesin motor mixtures, show a promising potential for achieving self-sustained flows. However, to develop active microfluidics it is necessary to…

Soft Condensed Matter · Physics 2019-01-23 Santhan Chandragiri , Amin Doostmohammadi , Julia M Yeomans , Sumesh P Thampi

Self-propulsion allows living systems to display unusual collective behavior. Unlike passive systems in thermal equilibrium, active matter systems are not constrained by conventional thermodynamic laws. A question arises however as to what…

Soft Condensed Matter · Physics 2015-03-18 Sho C. Takatori , John F. Brady

We consider a simple model of an internally driven self-rotating object; a rotor, confined to two dimensions by a thin film of low Reynolds number fluid. We undertake a detailed study of the hydrodynamic interactions between a pair of…

Soft Condensed Matter · Physics 2015-05-20 M. Leoni , T. B. Liverpool

The study of active matter consisting of many self-propelled (active) swimmers in an imposed flow is important for many applications. Self-propelled swimmers may represent both living and artificial ones such as bacteria and chemically…

Soft Condensed Matter · Physics 2019-03-19 Leonid Berlyand , Pierre-Emmanuel Jabin , Mykhailo Potomkin , Elzbieta Ratajczyk

The dynamics within active fluids, driven by internal activity of the self-propelled particles, is a subject of intense study in non-equilibrium physics. These systems have been explored using simulations, where the motion of a passive…

Biological Physics · Physics 2018-04-03 Saroj Kumar Nandi , Nir S. Gov

Molecular dynamics simulations are performed to study the temperature-dependent dynamics and structures of the hydration shells of elastin-like and collagen-like peptides. For both model peptides, it is consistently observed that, upon…

Soft Condensed Matter · Physics 2009-02-23 Michael Vogel

Self-organization of moving objects in hydrodynamic environments has recently attracted considerable attention in connection to natural phenomena and living systems. However, the underlying physical mechanism is much less clear due to the…

Soft Condensed Matter · Physics 2015-02-19 Yusuke Goto , Hajime Tanaka

We study the spatio-temporal dynamics of a model of polar active fluid in two dimensions. The system exhibits a transition from an isotropic to a polarized state as a function of density. The uniform polarized state is, however, unstable…

Soft Condensed Matter · Physics 2011-12-08 Luca Giomi , M. Cristina Marchetti

Modeling the dynamics of colloidal rods remains a central challenge in soft-matter physics due to the anisotropic and long-ranged nature of their interactions. Hydrodynamic interactions in rods suspensions are often assumed to be screened…

Soft Condensed Matter · Physics 2026-05-19 Lucas H. P. Cunha , Paul F. Salipante , Peter D. Olmsted , Steven D. Hudson

Active matter concerns many-body systems comprised of living or self-driven agents that collectively exhibit macroscopic phenomena distinct from conventional passive matter. Using Schwinger-Keldysh effective field theory, we develop a novel…

Soft Condensed Matter · Physics 2025-11-07 Jay Armas , Akash Jain , Ruben Lier

Collective dynamics can be observed among many animal species, and have given rise in the last decades to an active and interdisciplinary field of study. Such behaviors are often modeled by active matter, in which each individual is…

Mathematical Physics · Physics 2021-08-31 Clément Erignoux

We analyze the transport properties of a low density ensemble of identical macroscopic particles immersed in an active fluid. The particles are modeled as inelastic hard spheres (granular gas). The non-homogeneous active fluid is modeled by…

Soft Condensed Matter · Physics 2017-10-17 Francisco Vega Reyes , Antonio Lasanta

Self-propelling active matter relies on the conversion of energy from the undirected, nanoscopic scale to directed, macroscopic motion. One of the challenges in the design of synthetic active matter lies in the control of dynamic states, or…

Fluid Dynamics · Physics 2025-03-10 Prashanth Ramesh , Yibo Chen , Petra Räder , Svenja Morsbach , Maziyar Jalaal , Corinna C Maass

Dense suspensions of self-propelled rod-like particles exhibit a fascinating variety of non-equilibrium phenomena. By means of computer simulations of a minimal model for rigid self-propelled colloidal rods with variable shape we explore…

Soft Condensed Matter · Physics 2015-06-04 H. H. Wensink , H. Löwen

We use coarse-grained molecular dynamics simulations to study the motility of a 2D vesicle containing self-propelled rods, as a function of the vesicle bending rigidity and the number density, length, and activity of the enclosed rods.…

Soft Condensed Matter · Physics 2023-03-29 Sarvesh Uplap , Michael F. Hagan , Aparna Baskaran

We employ a novel hydrodynamic framework for active matter coupled to an environment to study the local temperature of an active nematic, assuming proximity to thermal equilibrium. We show that, due to the mechanosensitivity of fuel…

Soft Condensed Matter · Physics 2026-04-15 Jay Armas , Akash Jain , Ruben Lier

The rotational dynamics of anisotropic particles advected in a turbulent fluid flow are important in many industrial and natural setting. Particle rotations are controlled by small scale properties of turbulence that are nearly universal,…

Fluid Dynamics · Physics 2013-04-19 Shima Parsa , Enrico Calzavarini , Federico Toschi , Greg A. Voth

We study the behavior of self-propelled nano- and micro-rods in three dimensions, confined between two parallel walls, by simulations and scaling arguments. Our simulations include thermal fluctuations and hydrodynamic interactions, which…

Biological Physics · Physics 2009-02-06 Jens Elgeti , Gerhard Gompper
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