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The problem of the definition and the estimation of generative models based on deformable templates from raw data is of particular importance for modelling non aligned data affected by various types of geometrical variability. This is…

Computation · Statistics 2009-01-16 Stéphanie Allassonnière , Estelle Kuhn , Alain Trouvé

Explaining complex or seemingly simple machine learning models is an important practical problem. We want to explain individual predictions from a complex machine learning model by learning simple, interpretable explanations. Shapley values…

Machine Learning · Statistics 2020-02-07 Kjersti Aas , Martin Jullum , Anders Løland

This work is concerned with approximating the smallest eigenvalue of a parameter-dependent Hermitian matrix $A(\mu)$ for many parameter values $\mu \in \mathbb{R}^P$. The design of reliable and efficient algorithms for addressing this task…

Numerical Analysis · Mathematics 2015-04-24 Petar Sirković , Daniel Kressner

Electrostatic potential fitting method (ESPF) is a powerful way of defining atomic charges derived from quantum density matrices fitted to reproduce a quantum mechanical charge distribution in the presence of an external electrostatic…

Chemical Physics · Physics 2020-11-20 Miquel Huix-Rotllant , Nicolas Ferré

Absorption and emission spectra of plasmas with multicharged-ions contain transition arrays with a huge number of coalescent electric-dipole (E1) lines, which are well suited for treatment by the unresolved transition array and derivative…

Atomic Physics · Physics 2015-05-28 Quentin Porcherot , Jean-Christophe Pain , Franck Gilleron , Thomas Blenski

Recently, supervised hashing methods have attracted much attention since they can optimize retrieval speed and storage cost while preserving semantic information. Because hashing codes learning is NP-hard, many methods resort to some form…

Machine Learning · Computer Science 2017-12-05 Zihao Hu , Xiyi Luo , Hongtao Lu , Yong Yu

Representing molecular structures effectively in chemistry remains a challenging task. Language models and graph-based models are extensively utilized within this domain, consistently achieving state-of-the-art results across an array of…

Machine Learning · Computer Science 2025-05-27 Nikolai Rekut , Alexey Orlov , Klea Ziu , Elizaveta Starykh , Martin Takac , Aleksandr Beznosikov

Applications of Structural Health Monitoring (SHM) combined with Machine Learning (ML) techniques enhance real-time performance tracking and increase structural integrity awareness of civil, aerospace and automotive infrastructures. This…

The procedure for simulating the nuclear magnetic resonance spectrum linked to the spin system of a molecule for a certain nucleus entails diagonalizing the associated Hamiltonian matrix. As the dimensions of said matrix grow exponentially…

Quantum Physics · Physics 2024-10-29 Joaquín Ossorio-Castillo , Alexandre Rodríguez-Coello

Statistical learning algorithms are finding more and more applications in science and technology. Atomic-scale modeling is no exception, with machine learning becoming commonplace as a tool to predict energy, forces and properties of…

Chemical Physics · Physics 2020-12-09 Félix Musil , Michele Ceriotti

Density estimation plays a fundamental role in many areas of statistics and machine learning. Parametric, nonparametric and semiparametric density estimation methods have been proposed in the literature. Semiparametric density models are…

Statistics Theory · Mathematics 2019-01-11 Jian Shi , Jiahui Yu , Anna Liu , Yuedong Wang

Well-designed molecular representations (fingerprints) are vital to combine medical chemistry and deep learning. Whereas incorporating 3D geometry of molecules (i.e. conformations) in their representations seems beneficial, current 3D…

Machine Learning · Computer Science 2021-05-11 Ziyao Li , Shuwen Yang , Guojie Song , Lingsheng Cai

Hidden Markov models (HMMs) are widely used statistical models for modeling sequential data. The parameter estimation for HMMs from time series data is an important learning problem. The predominant methods for parameter estimation are…

Machine Learning · Computer Science 2014-04-30 Carl Mattfeld

The output of spectral clustering is a collection of eigenvalues and eigenvectors that encode important connectivity information about a graph or a manifold. This connectivity information is often not cleanly represented in the eigenvectors…

Numerical Analysis · Mathematics 2019-05-22 Gary Froyland , Christopher P. Rock , Konstantinos Sakellariou

We develop a stochastic formulation of the optimally-tuned range-separated hybrid density functional theory which enables significant reduction of the computational effort and scaling of the non-local exchange operator at the price of…

Chemical Physics · Physics 2016-09-28 Daniel Neuhauser , Eran Rabani , Yael Cytter , Roi Baer

It is of some interest to understand how statistically based mechanisms for signal processing might be integrated with biologically motivated mechanisms such as neural networks. This paper explores a novel hybrid approach for classifying…

Neural and Evolutionary Computing · Computer Science 2016-07-22 Amirhossein Tavanaei , Anthony S Maida

Modern high-energy physics (HEP) experiments are increasingly challenged by the vast size and complexity of their datasets, particularly regarding large-scale point cloud processing and long sequences. In this study, to address these…

Machine Learning · Computer Science 2025-01-28 Cheng Jiang , Sitian Qian

A randomized algorithm for computing a data sparse representation of a given rank structured matrix $A$ (a.k.a. an $H$-matrix) is presented. The algorithm draws on the randomized singular value decomposition (RSVD), and operates under the…

Numerical Analysis · Mathematics 2024-06-25 James Levitt , Per-Gunnar Martinsson

Shape memory alloys are remarkable 'smart' materials used in a broad spectrum of applications, ranging from aerospace to robotics, thanks to their unique thermomechanical coupling capabilities. Given the complex properties of shape memory…

Computational Engineering, Finance, and Science · Computer Science 2024-02-19 C. Erdogan , T. Bode , P. Junker

In the context of two particularly interesting non-Hermitian models in quantum mechanics we explore the relationship between the original Hamiltonian H and its Hermitian counterpart h, obtained from H by a similarity transformation, as…

Quantum Physics · Physics 2009-11-10 H. F. Jones
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