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A generalized de Bruijn digraph generalizes a de Bruijn digraph to the case where the number of vertices need not be a pure power of an integer. Hamiltonian cycles in these digraphs thus generalize regular de~Bruijn cycles, and we will thus…

Combinatorics · Mathematics 2020-02-25 Abbas Alhakim

In this paper, we develop a structure theory for generalized spectral sequences, which are derived from chain complexes that are filtered over arbitrary partially ordered sets. Also, a more general construction method reminiscent of exact…

Algebraic Topology · Mathematics 2022-03-21 Benjamin Matschke

An M-sequence generated by a primitive polynomial has many interesting and desirable properties. A pseudo-random array is the two-dimensional generalization of an M-sequence. There are non-primitive polynomials all of whose non-zero…

Information Theory · Computer Science 2025-08-20 Simon Blackburn , Yeow Meng Chee , Tuvi Etzion , Huimin Lao

We study how to generate binary de Bruijn sequences efficiently from the class of simple linear feedback shift registers with feedback function $f(x_0, x_1, \ldots, x_{n-1}) = x_0 + x_1 + x_{n-1}$ for $n \geq 3$, using the cycle joining…

Information Theory · Computer Science 2021-05-27 Yunlong Zhu , Zuling Chang , Martianus Frederic Ezerman , Qiang Wang

Background Nucleotide sequences contain multiple codes responsible for organism's functioning and structure. They can be investigated by various signal processing methods. These techniques are well suited for indication of frequently…

Quantitative Methods · Quantitative Biology 2007-05-23 Simon Kogan

A binary modified de Bruijn sequence is an infinite and periodic binary sequence derived by removing a zero from the longest run of zeros in a binary de Bruijn sequence. The minimal polynomial of the modified sequence is its unique…

Information Theory · Computer Science 2022-02-04 Musthofa , Indah Emilia Wijayanti , Diah Junia Eksi Palupi , Martianus Frederic Ezerman

We address the issues of decoherence, frustrated hops and internal consistency in surface hopping. We demonstrate that moving away from an independent-trajectory picture is the strategy which allows us to propose a robust surface hopping…

Chemical Physics · Physics 2025-09-01 Lea M. Ibele , Eduarda Sangiogo Gil , Peter Schürger , Rodrigue Noc , Federica Agostini

A de Bruijn torus is the two dimensional generalization of a de Bruijn sequence. While some methods exist to generate these tori, only a few methods of construction are known. We present a novel method to generate de Bruijn tori with…

Combinatorics · Mathematics 2023-07-11 Matthew Kreitzer , Mihai Nica , Rajesh Pereira

We propose a new camera-based method of robot identification, tracking and orientation estimation. The system utilises coloured lights mounted in a circle around each robot to create unique colour sequences that are observed by a camera.…

Combinatorics · Mathematics 2017-07-18 Tony Grubman , Y. Ahmet Şekercioğlu , David R. Wood

Persistent homology provides information about the lifetime of homology classes along a filtration of cell complexes. Persistence barcode is a graphical representation of such information. A filtration might be determined by time in a set…

Computer Vision and Pattern Recognition · Computer Science 2018-01-04 Rocio Gonzalez-Diaz , Maria-Jose Jimenez , Belen Medrano

We develop a new approach to random walks on de Bruijn graphs over the alphabet $A$ through right congruences on $A^k$, defined using the natural right action of $A^+$. A major role is played by special right congruences, which correspond…

Group Theory · Mathematics 2016-07-08 John Rhodes , Anne Schilling , Pedro V. Silva

Subspace codes and particularly constant dimension codes have attracted much attention in recent years due to their applications in random network coding. As a particular subclass of subspace codes, cyclic subspace codes have additional…

Information Theory · Computer Science 2017-07-17 Bocong Chen , Hongwei Liu

A method for encoding and decoding spectrum shaped binary run-length constrained sequences is described. The binary sequences with predefined range of exponential sums are introduced. On the base of Cover's enumerative scheme, recurrence…

Information Theory · Computer Science 2010-01-26 Oleg F. Kurmaev

The discrepancy of a binary string is the maximum (absolute) difference between the number of ones and the number of zeroes over all possible substrings of the given binary string. In this note we determine the minimal discrepancy that a…

Discrete Mathematics · Computer Science 2024-07-25 Nicolás Álvarez , Verónica Becher , Martín Mereb , Ivo Pajor , Carlos Miguel Soto

Sequences with a low correlation have very important applications in communications, cryptography, and compressed sensing. In the literature, many efforts have been made to construct good sequences with various lengths where binary…

Information Theory · Computer Science 2022-10-25 Lingfei Jin , Liming Ma , Chaoping Xing

Aligning a sequence to a walk in a labeled graph is a problem of fundamental importance to Computational Biology. For finding a walk in an arbitrary graph with $|E|$ edges that exactly matches a pattern of length $m$, a lower bound based on…

Data Structures and Algorithms · Computer Science 2022-02-01 Daniel Gibney , Sharma V. Thankachan , Srinivas Aluru

The theme of this article is a "reciprocity" between bounded up-down paths and bounded alternating sequences. Roughly speaking, this ``reciprocity" manifests itself by the fact that the extension of the sequence of numbers of paths of…

Combinatorics · Mathematics 2024-07-30 Johann Cigler , Christian Krattenthaler

In this paper, we propose new coupled codes constructed by overlapping circular spatially-coupled low-density parity-check (SC-LDPC) codes, which show better asymptotic and finite-length decoding performance compared to the conventional…

Information Theory · Computer Science 2018-03-28 Heeyoul Kwak , Bohwan Jun , Pilwoong Yang , Jong-Seon No , Dong-Joon Shin

We present sufficient conditions for when an ordering of universal cycles $\alpha_1, \alpha_2, \ldots, \alpha_m$ for disjoint sets $\mathbf{S}_1, \mathbf{S}_2, \ldots , \mathbf{S}_m$ can be concatenated together to obtain a universal cycle…

Combinatorics · Mathematics 2018-06-25 Daniel Gabric , Joe Sawada

The graph of overlapping permutations is a directed graph that is an analogue to the De Bruijn graph. It consists of vertices that are permutations of length $n$ and edges that are permutations of length $n+1$ in which an edge $a_1\cdots…

Combinatorics · Mathematics 2016-09-09 John Asplund , N. Bradley Fox