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Neural network models can now recognise images, understand text, translate languages, and play many human games at human or superhuman levels. These systems are highly abstracted, but are inspired by biological brains and use only…

Neurons and Cognition · Quantitative Biology 2019-03-06 Katherine R. Storrs , Nikolaus Kriegeskorte

It is still not fully understood exactly how neural networks are able to solve the complex tasks that have recently pushed AI research forward. We present a novel method for determining how information is structured inside a neural network.…

Neural and Evolutionary Computing · Computer Science 2019-02-04 Peter E. Lillian , Richard Meyes , Tobias Meisen

Background: The study of genome-scale metabolic models and their underlying networks is one of the most important fields in systems biology. The complexity of these models and their description makes the use of computational tools an…

Molecular Networks · Quantitative Biology 2012-12-03 D. Gamermann , A. Montagud , R. A. Jaime Infante , J. Triana , P. F. de Córdoba , J. F. Urchueguía

EpiLearn is a Python toolkit developed for modeling, simulating, and analyzing epidemic data. Although there exist several packages that also deal with epidemic modeling, they are often restricted to mechanistic models or traditional…

Machine Learning · Computer Science 2024-09-10 Zewen Liu , Yunxiao Li , Mingyang Wei , Guancheng Wan , Max S. Y. Lau , Wei Jin

Leading experts from both communities have suggested the need to (re)connect research in neuroscience and artificial intelligence (AI) to accelerate the development of next-generation AI innovations. They term this convergence as NeuroAI.…

Interpretability has emerged as a crucial aspect of building trust in machine learning systems, aimed at providing insights into the working of complex neural networks that are otherwise opaque to a user. There are a plethora of existing…

Machine Learning · Statistics 2021-01-19 Rushil Anirudh , Jayaraman J. Thiagarajan , Rahul Sridhar , Peer-Timo Bremer

DORAEMON is an open-source PyTorch library that unifies visual object modeling and representation learning across diverse scales. A single YAML-driven workflow covers classification, retrieval and metric learning; more than 1000 pretrained…

Computer Vision and Pattern Recognition · Computer Science 2025-11-07 Ke Du , Yimin Peng , Chao Gao , Fan Zhou , Siqiao Xue

Layers is an open source neural network toolkit aim at providing an easy way to implement modern neural networks. The main user target are students and to this end layers provides an easy scriptting language that can be early adopted. The…

Neural and Evolutionary Computing · Computer Science 2016-10-07 Roberto Paredes , José-Miguel Benedí

Hypernetworks, or hypernets for short, are neural networks that generate weights for another neural network, known as the target network. They have emerged as a powerful deep learning technique that allows for greater flexibility,…

Machine Learning · Computer Science 2025-01-03 Vinod Kumar Chauhan , Jiandong Zhou , Ping Lu , Soheila Molaei , David A. Clifton

We present nerblackbox, a python library to facilitate the use of state-of-the-art transformer-based models for named entity recognition. It provides simple-to-use yet powerful methods to access data and models from a wide range of sources,…

Computation and Language · Computer Science 2023-12-08 Felix Stollenwerk

This article describes a new type of artificial neuron, called the authors "cyberneuron". Unlike classical models of artificial neurons, this type of neuron used table substitution instead of the operation of multiplication of input values…

Neural and Evolutionary Computing · Computer Science 2009-07-02 S. V. Polikarpov , V. S. Dergachev , K. E. Rumyantsev , D. M. Golubchikov

Neural networks have in recent years shown promise for helping software engineers write programs and even formally verify them. While semantic information plays a crucial part in these processes, it remains unclear to what degree popular…

Machine Learning · Computer Science 2023-06-27 Shizhuo Dylan Zhang , Curt Tigges , Stella Biderman , Maxim Raginsky , Talia Ringer

As deep learning systems are scaled up to many billions of parameters, relating their internal structure to external behaviors becomes very challenging. Although daunting, this problem is not new: Neuroscientists and cognitive scientists…

The weights of neural networks have emerged as a novel data modality, giving rise to the field of weight space learning. A central challenge in this area is that learning meaningful representations of weights typically requires large,…

Machine Learning · Computer Science 2025-10-03 Damian Falk , Konstantin Schürholt , Konstantinos Tzevelekakis , Léo Meynent , Damian Borth

Hyperbolic geometry has emerged as a powerful tool for modeling complex, structured data, particularly where hierarchical or tree-like relationships are present. By enabling embeddings with lower distortion, hyperbolic neural networks offer…

Machine Learning · Computer Science 2025-06-18 Pol Arévalo , Alexis Molina , Álvaro Ciudad

Recent advances in high-resolution microscopy have allowed scientists to better understand the underlying brain connectivity. However, due to the limitation that biological specimens can only be imaged at a single timepoint, studying…

Machine Learning · Computer Science 2022-02-03 Saeed Boorboor , Shawn Mathew , Mala Ananth , David Talmage , Lorna W. Role , Arie E. Kaufman

Fast and accurate predictions for complex physical dynamics are a significant challenge across various applications. Real-time prediction on resource-constrained hardware is even more crucial in real-world problems. The deep operator…

Machine Learning · Computer Science 2023-12-27 Jae Yong Lee , Sung Woong Cho , Hyung Ju Hwang

The proliferation of deep neural networks in various domains has seen an increased need for interpretability of these models. Preliminary work done along this line and papers that surveyed such, are focused on high-level representation…

Computation and Language · Computer Science 2022-08-17 Hassan Sajjad , Nadir Durrani , Fahim Dalvi

Medical image analysis and computer-assisted intervention problems are increasingly being addressed with deep-learning-based solutions. Established deep-learning platforms are flexible but do not provide specific functionality for medical…

Ultrasound imaging is widely used in clinical practice due to its cost-effectiveness, mobility, and safety. However, current AI research often treats disease prediction and tissue segmentation as two separate tasks and their model requires…

Image and Video Processing · Electrical Eng. & Systems 2026-03-10 Zhi Chen , Le Zhang