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Containers are an emerging technology that hold promise for improving productivity and code portability in scientific computing. We examine Linux container technology for the distribution of a non-trivial scientific computing software stack…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-06-19 Jack S. Hale , Lizao Li , Chris N. Richardson , Garth N. Wells

Linux container technologies such as Docker and Singularity offer encapsulated environments for easy execution of software. In high performance computing, this is especially important for evolving and complex software stacks with…

Operating Systems · Computer Science 2022-12-15 Vanessa Sochat , Matthieu Muffato , Audrey Stott , Marco De La Pierre , Georgia Stuart

HPC centers face increasing demand for software flexibility, and there is growing consensus that Linux containers are a promising solution. However, existing container build solutions require root privileges and cannot be used directly on…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-02-02 Reid Priedhorsky , R. Shane Canon , Timothy Randles , Andrew J. Younge

Containers improve the efficiency in application deployment and thus have been widely utilised on Cloud and lately in High Performance Computing (HPC) environments. Containers encapsulate complex programs with their dependencies in isolated…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-12-20 Naweiluo Zhou , Huan Zhou , Dennis Hoppe

Critical goals of scientific computing are to increase scientific rigor, reproducibility, and transparency while keeping up with ever-increasing computational demands. This work presents an integrated framework well-suited for data…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-10-13 Paul Nuyujukian

Variations in High Performance Computing (HPC) system software configurations mean that applications are typically configured and built for specific HPC environments. Building applications can require a significant investment of time and…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-03-02 Jieyang Chen , Qiang Guan , Xin Liang , Louis James Vernon , Allen McPherson , Li-Ta Lo , Zizhong Chen , James Paul Ahrens

With the growing use of embedded systems in various industries, the need for automated platforms for the development and deployment of customized Linux-based operating systems has become more important. This research was conducted with the…

Software Engineering · Computer Science 2025-10-27 Behnam Agahi , Hamed Farbeh

Container technologies such as Docker have become a crucial component of many software industry practices especially those pertaining to reproducibility and portability. The containerization philosophy has influenced the scientific…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-08-05 Peter Z. Vaillancourt , J. Eric Coulter , Richard Knepper , Brandon Barker

Building and deploying software on high-end computing systems is a challenging task. High performance applications have to reliably run across multiple platforms and environments, and make use of site-specific resources while resolving…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-12 Lucas Benedicic , Felipe A. Cruz , Alberto Madonna , Kean Mariotti

Containers offer an array of advantages that benefit research reproducibility and portability across groups and systems. As container tools mature, container security improves, and High-performance computing (HPC) and cloud system tools…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-08-24 Tiziano Müller , Nina Mujkanovic , Juan J. Durillo , Nicolay Hammer

Containers are increasingly used as means to distribute and run Linux services and applications. In this paper we describe the architectural design and implementation of udocker, a tool which enables the user to execute Linux containers in…

Software Engineering · Computer Science 2018-08-07 Jorge Gomes , Isabel Campos , Emanuele Bagnaschi , Mario David , Luis Alves , Joao Martins , Joao Pina , Alvaro Lopez-Garcia , Pablo Orviz

Lightweight containers provide an efficient approach for deploying computation-intensive applications in network edge. The layered storage structure of container images can further reduce the deployment cost and container startup time.…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-06-05 Zhiqing Tang , Wentao Peng , Jianxiong Guo , Jiong Lou , Hanshuai Cui , Tian Wang , Yuan Wu , Weijia Jia

Packaging software into containers is becoming a common practice when deploying services in cloud and other environments. Docker images are one of the most popular container technologies for building and deploying containers. A container…

Software Engineering · Computer Science 2019-02-27 Ahmed Zerouali , Tom Mens , Gregorio Robles , Jesus Gonzalez-Barahona

Container technologies, like Docker, are becoming increasingly popular. Containers provide exceptional developer experience because containers offer lightweight isolation and ease of software distribution. Containers are also widely used in…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-03-01 Pablo Chico de Guzman , Felipe Gorostiaga , Cesar Sanchez

Recent development in lightweight OS-level virtualization, containers, provides a potential solution for running HPC applications on the cloud platform. In this work, we focus on the impact of different layers in a containerized environment…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-18 Daniel Medeiros , Gabin Schieffer , Jacob Wahlgren , Ivy Peng

HPC-based applications often have complex workflows with many software dependencies that hinder their portability on contemporary HPC architectures. In addition, these applications often require extraordinary efforts to deploy and execute…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-12-14 Sameh Abdulah , Jorge Ejarque , Omar Marzouk , Hatem Ltaief , Ying Sun , Marc G. Genton , Rosa M. Badia , David E. Keyes

Reproducible container builds promise a simple integrity check for software supply chains: rebuild an image from its Dockerfile and compare hashes. We build a Docker measurement pipeline and apply it to a stratified sample of 2,000 GitHub…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-02-23 Oreofe Solarin

Scientific applications in HPC environment are more com-plex and more data-intensive nowadays. Scientists usually rely on workflow system to manage the complexity: simply define multiple processing steps into a single script and let the…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-05-17 Dong Dai , Robert Ross , Dounia Khaldi , Yonghong Yan , Matthieu Dorier , Neda Tavakoli , Yong Chen

In modern cloud and heterogeneous distributed infrastructures, container images are widely used as the deployment unit for machine learning applications. An image bundles the application with its entire platform-specific execution…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-04-14 Fengzhi Li , Xiaohui Peng , Qingru Xu , Qisong Shi , Tuo Zhou , Yongxuan Dai , Yifan Wang , Ninghui Sun , Zhiwei Xu

The increasing interest in the usage of Artificial Intelligence techniques (AI) from the research community and industry to tackle "real world" problems, requires High Performance Computing (HPC) resources to efficiently compute and scale…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-01-14 David Brayford , Sofia Vallecorsa , Atanas Atanasov , Fabio Baruffa , Walter Riviera
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