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Understanding E3 ligase and target substrate interactions are important for cell biology and therapeutic development. However, experimental identification of E3 target relationships is not an easy task due to the labor-intensive nature of…

Biomolecules · Quantitative Biology 2020-07-24 Seongyong Park , Shujaat Khan , Abdul Wahab

Motivated by the intuition that one can transform two aligned point clouds to each other more easily and meaningfully than a misaligned pair, we propose CorrNet3D -- the first unsupervised and end-to-end deep learning-based framework -- to…

Computer Vision and Pattern Recognition · Computer Science 2021-05-04 Yiming Zeng , Yue Qian , Zhiyu Zhu , Junhui Hou , Hui Yuan , Ying He

Multimodal language models (MLLMs) are increasingly being applied in real-world environments, necessitating their ability to interpret 3D spaces and comprehend temporal dynamics. Current methods often rely on specialized architectural…

Computer Vision and Pattern Recognition · Computer Science 2024-11-22 Benlin Liu , Yuhao Dong , Yiqin Wang , Zixian Ma , Yansong Tang , Luming Tang , Yongming Rao , Wei-Chiu Ma , Ranjay Krishna

In this paper, we explore an open research problem concerning the reconstruction of 3D scenes from images. Recent methods have adopt 3D Gaussian Splatting (3DGS) to produce 3D scenes due to its efficient training process. However, these…

Computer Vision and Pattern Recognition · Computer Science 2025-04-21 Beizhen Zhao , Yifan Zhou , Zijian Wang , Hao Wang

Processing long contexts is increasingly important for Large Language Models (LLMs) in tasks like multi-turn dialogues, code generation, and document summarization. This paper addresses the challenges of achieving high long-context…

Computation and Language · Computer Science 2026-04-15 Zihan Liao , Jun Wang , Hang Yu , Lingxiao Wei , Jianguo Li , Jun Wang , Wei Zhang

In this paper, we present a novel approach for conformal prediction (CP), in which we aim to identify a set of promising prediction candidates -- in place of a single prediction. This set is guaranteed to contain a correct answer with high…

Machine Learning · Computer Science 2021-02-03 Adam Fisch , Tal Schuster , Tommi Jaakkola , Regina Barzilay

We present Neural Correspondence Prior (NCP), a new paradigm for computing correspondences between 3D shapes. Our approach is fully unsupervised and can lead to high-quality correspondences even in challenging cases such as sparse point…

Computer Vision and Pattern Recognition · Computer Science 2023-03-28 Souhaib Attaiki , Maks Ovsjanikov

Large Language Models (LLMs) have gained significant attention in on-device applications due to their remarkable performance across real-world tasks. However, on-device LLMs often suffer from suboptimal performance due to hardware…

Computation and Language · Computer Science 2025-03-03 Kai Zhang , Congchao Wang , Liqian Peng , Alec Go , Xiaozhong Liu

Classification and clustering algorithms have been proved to be successful individually in different contexts. Both of them have their own advantages and limitations. For instance, although classification algorithms are more powerful than…

Machine Learning · Computer Science 2017-08-30 Tanmoy Chakraborty

Evolving Cascade Neural Networks (ECNNs) and a new training algorithm capable of selecting informative features are described. The ECNN initially learns with one input node and then evolves by adding new inputs as well as new hidden…

Neural and Evolutionary Computing · Computer Science 2007-05-23 Vitaly Schetinin

The deep-learning based image matching networks can now handle significantly larger variations in viewpoints and illuminations while providing matched pairs of pixels with sub-pixel precision. These networks have been trained with…

Computer Vision and Pattern Recognition · Computer Science 2026-03-24 Rahul Deshmukh , Aditya Chauhan , Avinash Kak

Cross-entropy loss has long been the standard choice for training deep neural networks, yet it suffers from interpretability limitations, unbounded weight growth, and inefficiencies that can contribute to costly training dynamics. The…

Machine Learning · Computer Science 2026-04-30 Maxwell Miller-Golub , Collin Coil , Kamil Faber , Marcin Pietron , Panpan Zheng , Pasquale Minervini , Roberto Corizzo

Estimating correspondences between pairs of non-rigid deformable 3D shapes remains a significant challenge in computer vision and graphics. While deep functional map methods have become the go-to solution for addressing this problem, they…

Computer Vision and Pattern Recognition · Computer Science 2026-03-20 Feifan Luo , Hongyang Chen

Many algorithms for the computation of correspondences between deformable shapes rely on some variant of nearest neighbor matching in a descriptor space. Such are, for example, various point-wise correspondence recovery algorithms used as a…

Computer Vision and Pattern Recognition · Computer Science 2016-07-13 Matthias Vestner , Roee Litman , Alex Bronstein , Emanuele Rodolà , Daniel Cremers

Estimating relative pose from image pairs fundamentally requires only a minimal subset of geometrically consistent correspondences. However, most learning-based approaches rely on dense matching or direct regression, leading to redundancy…

Computer Vision and Pattern Recognition · Computer Science 2026-05-20 Prateeth Rao

Deep networks are nowadays becoming popular in many computer vision and pattern recognition tasks. Among these networks, deep kernels are particularly interesting and effective, however, their computational complexity is a major issue…

Computer Vision and Pattern Recognition · Computer Science 2018-12-24 Hichem Sahbi

While next-token prediction is considered a promising path towards artificial general intelligence, it has struggled to excel in multimodal tasks, which are still dominated by diffusion models (e.g., Stable Diffusion) and compositional…

Recent convolutional neural networks, especially end-to-end disparity estimation models, achieve remarkable performance on stereo matching task. However, existed methods, even with the complicated cascade structure, may fail in the regions…

Computer Vision and Pattern Recognition · Computer Science 2018-09-25 Xiao Song , Xu Zhao , Hanwen Hu , Liangji Fang

Video frame synthesis, which consists of interpolation and extrapolation, is an essential video processing technique that can be applied to various scenarios. However, most existing methods cannot handle small objects or large motion well,…

Computer Vision and Pattern Recognition · Computer Science 2022-07-15 Zhaoyang Jia , Yan Lu , Houqiang Li

Protein contacts contain important information for protein structure and functional study, but contact prediction from sequence information remains very challenging. Recently evolutionary coupling (EC) analysis, which predicts contacts by…

Quantitative Methods · Quantitative Biology 2015-12-01 Siqi Sun , Jianzhu Ma , Sheng Wang , Jinbo Xu