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In many data sets, crucial information on the structure and temporality of a system coexists with noise and non-essential elements. In networked systems, for instance, some edges might be non-essential or exist only by chance. Filtering…

Physics and Society · Physics 2019-01-16 Teruyoshi Kobayashi , Taro Takaguchi , Alain Barrat

Narratives are fundamental to our perception of the world and are pervasive in all activities that involve the representation of events in time. Yet, modern online information systems do not incorporate narratives in their representation of…

Human-Computer Interaction · Computer Science 2020-10-27 Brian Keith , Tanushree Mitra

Finding densely connected subsets of vertices in an unsupervised setting, called clustering or community detection, is one of the fundamental problems in network science. The edge clustering approach instead detects communities by…

Social and Information Networks · Computer Science 2026-03-02 Ryan DeWolfe , François Théberge

Species interactions (ranging from direct predator prey relationships to indirect effects mediated by the environment) are central to ecosystem balance and biodiversity. While empirical methods for measuring these interactions exist, their…

Populations and Evolution · Quantitative Biology 2025-08-27 Javier Aguilar , Samir Suweis , Amos Maritan , Sandro Azaele

Dynamics of complex social systems has often been described in the framework of temporal networks, where links are considered to exist only at the moment of interaction between nodes. Such interaction patterns are not only driven by…

Physics and Society · Physics 2021-06-09 Hyewon Kim , Hang-Hyun Jo , Hawoong Jeong

We demonstrate that graph-based models are fully capable of representing higher-order interactions, and have a long history of being used for precisely this purpose. This stands in contrast to a common claim in the recent literature on…

Physics and Society · Physics 2026-02-20 Tiago P. Peixoto , Leto Peel , Thilo Gross , Manlio De Domenico

Hierarchical structure and repetition are prevalent in graphs originating from nature or engineering. These patterns can be represented by a class of parametric-structure graphs, which are defined by templates that generate structure by way…

Data Structures and Algorithms · Computer Science 2020-11-16 Tal Ben-Nun , Lukas Gianinazzi , Torsten Hoefler , Yishai Oltchik

Dynamical systems across many disciplines are modeled as interacting particles or agents, with interaction rules that depend on a very small number of variables (e.g. pairwise distances, pairwise differences of phases, etc...), functions of…

Machine Learning · Computer Science 2022-08-05 Jinchao Feng , Mauro Maggioni , Patrick Martin , Ming Zhong

A popular approach to model interactions is to represent them as a network with nodes being the agents and the interactions being the edges. Interactions are often timestamped, which leads to having timestamped edges. Many real-world…

Social and Information Networks · Computer Science 2023-08-30 Chamalee Wickrama Arachchi , Nikolaj Tatti

One challenge of physics is to explain how collective properties arise from microscopic interactions. Indeed, interactions form the building blocks of almost all physical theories and are described by polynomial terms in the action. The…

Disordered Systems and Neural Networks · Physics 2023-05-03 Claudia Merger , Alexandre René , Kirsten Fischer , Peter Bouss , Sandra Nestler , David Dahmen , Carsten Honerkamp , Moritz Helias

This paper introduces a novel framework for modeling temporal events with complex longitudinal dependency that are generated by dependent sources. This framework takes advantage of multidimensional point processes for modeling time of…

Machine Learning · Statistics 2016-10-04 Seyed Abbas Hosseini , Ali Khodadadi , Soheil Arabzade , Hamid R. Rabiee

Accessing the network through which a propagation dynamics diffuse is essential for understanding and controlling it. In a few cases, such information is available through direct experiments or thanks to the very nature of propagation data.…

Physics and Society · Physics 2020-12-15 Alfredo Braunstein , Alessandro Ingrosso , Anna Paola Muntoni

The presence of one or more species at some spatial locations but not others is a central matter in ecology. This phenomenon is related to ecological pattern formation. Nonlocal interactions can be considered as one of the mechanisms…

Populations and Evolution · Quantitative Biology 2017-12-29 Ozgur Aydogmus

Representation is the way in which human beings re-present the reality of what is happening, both externally and internally. Thus, visual representation as a means of communication uses elements to build a narrative, just as spoken and…

Computer Vision and Pattern Recognition · Computer Science 2021-12-16 María Jesús Cano-Martínez , Miguel Carrasco , Joaquín Sandoval , César González-Martín

From social networks to Internet applications, a wide variety of electronic communication tools are producing streams of graph data; where the nodes represent users and the edges represent the contacts between them over time. This has led…

Social and Information Networks · Computer Science 2014-03-18 Nesreen K. Ahmed , Christopher Cole , Jennifer Neville

High-order interaction events are common in real-world applications. Learning embeddings that encode the complex relationships of the participants from these events is of great importance in knowledge mining and predictive tasks. Despite…

Machine Learning · Computer Science 2022-07-11 Zheng Wang , Yiming Xu , Conor Tillinghast , Shibo Li , Akil Narayan , Shandian Zhe

With the increasing use of IoT-enabled sensors, it is important to have effective methods for querying the sensors. For example, in a dense network of battery-driven temperature sensors, it is often possible to query (sample) just a subset…

Social and Information Networks · Computer Science 2022-02-21 Roshni Chakraborty , Josefine Holm , Torben Bach Pedersen , Petar Popovski

To understand the contact patterns of a population -- who is in contact with whom, and when the contacts happen -- is crucial for modeling outbreaks of infectious disease. Traditional theoretical epidemiology assumes that any individual can…

Populations and Evolution · Quantitative Biology 2015-10-22 Petter Holme

Ecological networks allow us to study the structure and function of ecosystems and gain insights on species resilience/stability. The study of this ecological networks is usually a snapshop focused in a limited specific range of space and…

Populations and Evolution · Quantitative Biology 2014-07-17 Andrzej Jarynowski , Fco. Alejandro Lopez-Nunez , Han Fan

There is increasing focus on analyzing data represented as hypergraphs, which are better able to express complex relationships amongst entities than are graphs. Much of the critical information about hypergraph structure is available only…

Data Structures and Algorithms · Computer Science 2023-07-24 Michael G. Rawson , Audun Myers , Robert Green , Michael Robinson , Cliff Joslyn
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