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As a fundamental tool in hierarchical graph clustering, computing connected components has been a central problem in large-scale data mining. While many known algorithms have been developed for this problem, they are either not scalable in…
This paper presents a graph signal processing algorithm to uncover the intrinsic low-rank components and the underlying graph of a high-dimensional, graph-smooth and grossly-corrupted dataset. In our problem formulation, we assume that the…
In this work, a graph partitioning problem in a fixed number of connected components is considered. Given an undirected graph with costs on the edges, the problem consists of partitioning the set of nodes into a fixed number of subsets with…
Knitting, an ancient fiber art, creates a structured fabric consisting of loops or stitches. Publishing hand knitting patterns involves lengthy testing periods and numerous knitters. Modeling knitting patterns with graphs can help expedite…
The problem of decomposing non-manifold object has already been studied in solid modeling. However, the few proposed solutions are limited to the problem of decomposing solids described through their boundaries. In this thesis we study the…
A satisfactory understanding of information processing in spiking neural networks requires appropriate computational abstractions of neural activity. Traditionally, the neural population state vector has been the most common abstraction…
Necessary and sufficient conditions for a sequence of positive integers to be the degree sequence of a 3-connected simple graph are detailed. Conditions are also given under which such a sequence is necessarily 3-connected i.e. the sequence…
Split decomposition of graphs was introduced by Cunningham (under the name join decomposition) as a generalization of the modular decomposition. This paper undertakes an investigation into the algorithmic properties of split decomposition.…
We introduce new sufficient conditions for intrinsic knotting and linking. A graph on n vertices with at least 4n-9 edges is intrinsically linked. A graph on n vertices with at least 5n-14 edges is intrinsically knotted. We also classify…
Suppose that a biconnected graph is given, consisting of a large component plus several other smaller components, each separated from the main component by a separation pair. We investigate the existence and the computation time of…
Graph mining analyzes real-world graphs to find core substructures (connected subgraphs) in applications modeled as graphs. Substructure discovery is a process that involves identifying meaningful patterns, structures, or components within…
Dynamics on and of networks refer to changes in topology and node-associated signals, respectively and are pervasive in many socio-technological systems, including social, biological, and infrastructure networks. Due to practical…
A graph $G=(V,E)$ is a {\it unipolar graph} if there exits a partition $V=V_1 \cup V_2$ such that, $V_1$ is a clique and $V_2$ induces the disjoint union of cliques. The complement-closed class of {\it generalized split graphs} are those…
We extend the decomposition approach for learning Bayesian networks (BNs) proposed by (Xie et. al.) to learning multivariate regression chain graphs (MVR CGs), which include BNs as a special case. The same advantages of this decomposition…
Graphlet analysis is an approach to network analysis that is particularly popular in bioinformatics. We show how to set up a system of linear equations that relate the orbit counts and can be used in an algorithm that is significantly…
Counting the frequency of small subgraphs is a fundamental technique in network analysis across various domains, most notably in bioinformatics and social networks. The special case of triangle counting has received much attention. Getting…
A graph $G$ is $k$-ordered if for any distinct vertices $v_1, v_2, \ldots, v_k \in V(G)$, it has a cycle through $v_1, v_2, \ldots, v_k$ in order. Let $f(k)$ denote the minimum integer so that every $f(k)$-connected graph is $k$-ordered.…
We introduce a span program that decides st-connectivity, and generalize the span program to develop quantum algorithms for several graph problems. First, we give an algorithm for st-connectivity that uses O(n d^{1/2}) quantum queries to…
A directed graph G (V, E) is strongly connected if and only if, for a pair of vertices X and Y from V, there exists a path from X to Y and a path from Y to X. In Computer Science, the partition of a graph in strongly connected components is…
Decomposing a graph into a hierarchical structure via $k$-core analysis is a standard operation in any modern graph-mining toolkit. $k$-core decomposition is a simple and efficient method that allows to analyze a graph beyond its mere…